Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU0464
Experiment: MoLS4 without Folic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Folic with Casamino acids (vit. assay) 0.05% |
|---|---|---|---|---|---|
| remove | |||||
| 531,925 | + | -2.0 | |||
| 531,986 | + | +0.4 | |||
| 532,039 | + | DVU0464 | 0.11 | -0.9 | |
| 532,087 | + | DVU0464 | 0.17 | -1.0 | |
| 532,260 | - | DVU0464 | 0.40 | -0.9 | |
| 532,347 | + | DVU0464 | 0.51 | +0.2 | |
| 532,436 | - | DVU0464 | 0.63 | -1.2 | |
| 532,436 | - | DVU0464 | 0.63 | -3.6 | |
| 532,552 | + | DVU0464 | 0.78 | -1.8 | |
| 532,557 | + | DVU0464 | 0.79 | +1.1 | |
| 532,678 | + | -0.7 | |||
| 532,692 | + | +0.3 | |||
| 532,700 | - | -1.1 | |||
| 532,722 | - | -2.8 | |||
| 532,737 | + | -0.7 | |||
| 532,844 | + | -0.0 | |||
| 532,917 | - | -3.7 | |||
| 532,938 | + | -0.0 | |||
| 532,948 | + | -1.0 | |||
| 532,951 | - | -1.9 | |||
| 532,956 | - | -4.0 | |||
| 532,961 | - | -3.3 | |||
| 533,078 | - | trpE | DVU0465 | 0.14 | -1.0 |
| 533,129 | + | trpE | DVU0465 | 0.17 | +0.6 |
| 533,153 | + | trpE | DVU0465 | 0.19 | -1.9 |
| 533,220 | + | trpE | DVU0465 | 0.23 | -1.6 |
| 533,286 | - | trpE | DVU0465 | 0.27 | -2.6 |
| 533,374 | - | trpE | DVU0465 | 0.33 | -3.6 |
| 533,461 | + | trpE | DVU0465 | 0.38 | -3.5 |
| 533,466 | + | trpE | DVU0465 | 0.38 | -4.0 |
| 533,489 | - | trpE | DVU0465 | 0.40 | -2.6 |
| 533,512 | + | trpE | DVU0465 | 0.41 | -4.6 |
| 533,547 | - | trpE | DVU0465 | 0.43 | +0.3 |
| 533,554 | - | trpE | DVU0465 | 0.44 | -2.0 |
| 533,608 | - | trpE | DVU0465 | 0.47 | -4.8 |
| 533,613 | - | trpE | DVU0465 | 0.48 | -2.1 |
| 533,615 | + | trpE | DVU0465 | 0.48 | -0.5 |
| 533,615 | + | trpE | DVU0465 | 0.48 | -3.8 |
| 533,623 | - | trpE | DVU0465 | 0.48 | -2.7 |
| 533,651 | - | trpE | DVU0465 | 0.50 | -1.0 |
| 533,687 | - | trpE | DVU0465 | 0.52 | -3.9 |
| 533,715 | - | trpE | DVU0465 | 0.54 | -3.1 |
| 533,719 | + | trpE | DVU0465 | 0.54 | -4.7 |
Or see this region's nucleotide sequence