Experiment: MoLS4 without Folic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0367 and tRNA-Met are separated by 143 nucleotides tRNA-Met and DVU0368 are separated by 692 nucleotides DVU0368 and DVU0369 are separated by 131 nucleotides DVU0369 and DVU0370 are separated by 91 nucleotides DVU0370 and DVU0371 are separated by 0 nucleotides
DVU0367: DVU0367 - Ser/Thr protein phosphatase family protein (TIGR), at 416,195 to 416,929
DVU0367
DVU_tRNA-Met-1: tRNA-Met - tRNA with anticodon CAT for Met (VIMSS-AUTO), at 417,073 to 417,149
tRNA-Met
DVU0368: DVU0368 - hypothetical protein (TIGR), at 417,842 to 417,946
DVU0368
DVU0369: DVU0369 - hypothetical protein (TIGR), at 418,078 to 418,176
DVU0369
DVU0370: DVU0370 - hypothetical protein (TIGR), at 418,268 to 418,411
DVU0370
DVU0371: DVU0371 - conserved hypothetical protein (TIGR), at 418,412 to 419,836
DVU0371
Position (kb) 417
418 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 416.847 kb on - strand, within DVU0367 at 416.847 kb on - strand, within DVU0367 at 416.945 kb on + strand at 416.945 kb on + strand at 417.205 kb on + strand at 417.213 kb on - strand at 417.274 kb on - strand at 417.283 kb on + strand at 417.285 kb on - strand at 417.308 kb on + strand at 417.398 kb on - strand at 417.435 kb on + strand at 417.497 kb on + strand at 417.619 kb on - strand at 417.619 kb on - strand at 417.628 kb on - strand at 417.715 kb on - strand at 417.749 kb on + strand at 417.784 kb on + strand at 417.785 kb on + strand at 417.793 kb on - strand at 417.793 kb on - strand at 417.814 kb on + strand at 417.814 kb on + strand at 417.815 kb on + strand at 417.822 kb on - strand at 417.822 kb on - strand at 417.822 kb on - strand at 417.913 kb on + strand, within DVU0368 at 417.921 kb on - strand, within DVU0368 at 418.453 kb on - strand at 418.469 kb on + strand at 418.607 kb on + strand, within DVU0371 at 418.710 kb on + strand, within DVU0371 at 418.718 kb on - strand, within DVU0371 at 418.728 kb on - strand, within DVU0371 at 418.767 kb on + strand, within DVU0371 at 418.830 kb on - strand, within DVU0371 at 418.833 kb on + strand, within DVU0371 at 418.841 kb on + strand, within DVU0371 at 418.860 kb on + strand, within DVU0371 at 418.866 kb on + strand, within DVU0371 at 418.886 kb on + strand, within DVU0371 at 418.891 kb on + strand, within DVU0371 at 418.894 kb on - strand, within DVU0371 at 418.894 kb on - strand, within DVU0371 at 418.894 kb on - strand, within DVU0371 at 418.904 kb on - strand, within DVU0371 at 418.904 kb on - strand, within DVU0371 at 418.906 kb on + strand, within DVU0371 at 418.928 kb on - strand, within DVU0371
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Folic with Casamino acids (vit. assay) 0.05% remove 416,847 - DVU0367 0.89 +0.4 416,847 - DVU0367 0.89 +1.5 416,945 + +0.3 416,945 + +3.1 417,205 + +0.1 417,213 - +0.2 417,274 - -0.5 417,283 + -0.5 417,285 - -0.9 417,308 + -1.8 417,398 - +1.0 417,435 + +0.0 417,497 + +0.5 417,619 - +0.1 417,619 - -0.0 417,628 - -0.8 417,715 - -0.4 417,749 + -0.4 417,784 + -0.2 417,785 + -0.0 417,793 - -0.6 417,793 - +0.5 417,814 + -0.1 417,814 + +0.6 417,815 + -0.8 417,822 - -0.0 417,822 - +2.5 417,822 - +0.6 417,913 + DVU0368 0.68 -2.5 417,921 - DVU0368 0.75 -0.4 418,453 - -0.0 418,469 + -0.2 418,607 + DVU0371 0.14 -0.6 418,710 + DVU0371 0.21 -0.3 418,718 - DVU0371 0.21 -1.5 418,728 - DVU0371 0.22 +0.0 418,767 + DVU0371 0.25 -0.3 418,830 - DVU0371 0.29 -0.8 418,833 + DVU0371 0.30 +1.5 418,841 + DVU0371 0.30 -0.3 418,860 + DVU0371 0.31 -0.0 418,866 + DVU0371 0.32 +0.1 418,886 + DVU0371 0.33 +2.0 418,891 + DVU0371 0.34 -0.0 418,894 - DVU0371 0.34 -1.7 418,894 - DVU0371 0.34 +0.7 418,894 - DVU0371 0.34 -1.0 418,904 - DVU0371 0.35 -0.1 418,904 - DVU0371 0.35 -0.2 418,906 + DVU0371 0.35 +0.2 418,928 - DVU0371 0.36 +0.0
Or see this region's nucleotide sequence