Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2650
Experiment: MoLS4 without Folic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoLS4 without Folic with Casamino acids (vit. assay) 0.05% |
---|---|---|---|---|---|
remove | |||||
2,764,742 | - | DVU2648 | 0.53 | -0.2 | |
2,764,767 | - | DVU2648 | 0.61 | +0.1 | |
2,764,848 | + | DVU2648 | 0.85 | -1.6 | |
2,764,856 | - | DVU2648 | 0.88 | +0.6 | |
2,764,875 | - | -0.4 | |||
2,764,899 | - | -0.7 | |||
2,764,922 | - | DVU2649 | 0.11 | +0.1 | |
2,764,944 | - | DVU2649 | 0.20 | -0.0 | |
2,764,944 | - | DVU2649 | 0.20 | +0.6 | |
2,764,955 | + | DVU2649 | 0.24 | +0.0 | |
2,765,045 | + | DVU2649 | 0.59 | -0.0 | |
2,765,053 | - | DVU2649 | 0.62 | +1.6 | |
2,765,350 | + | +1.3 | |||
2,765,360 | + | -1.3 | |||
2,765,390 | - | -0.1 | |||
2,765,524 | + | +1.4 | |||
2,765,532 | - | -0.2 | |||
2,765,582 | - | -0.9 | |||
2,765,654 | - | +0.1 | |||
2,765,654 | - | -0.5 | |||
2,765,771 | + | DVU2650 | 0.12 | +0.6 | |
2,765,926 | + | DVU2650 | 0.38 | -0.4 | |
2,765,964 | - | DVU2650 | 0.44 | -0.4 | |
2,765,977 | + | DVU2650 | 0.46 | -0.6 | |
2,766,015 | + | DVU2650 | 0.52 | -1.6 | |
2,766,068 | - | DVU2650 | 0.61 | +1.6 | |
2,766,068 | - | DVU2650 | 0.61 | -0.7 | |
2,766,437 | - | +2.3 | |||
2,766,684 | + | +2.6 | |||
2,766,703 | + | -0.5 | |||
2,766,918 | - | DVU2652 | 0.16 | -0.5 | |
2,767,225 | - | DVU2652 | 0.69 | +0.3 | |
2,767,268 | + | DVU2652 | 0.76 | -0.3 |
Or see this region's nucleotide sequence