Experiment: MoLS4 without Folic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1968 and DVU1969 are separated by 13 nucleotides DVU1969 and DVU1970 are separated by 8 nucleotides DVU1970 and DORF14650 are separated by 72 nucleotides DORF14650 and DVU1971 are separated by 242 nucleotides
DVU1968: DVU1968 - oxidoreductase, putative (TIGR), at 2,043,063 to 2,044,304
DVU1968
DVU1969: DVU1969 - hypothetical protein (TIGR), at 2,044,318 to 2,045,013
DVU1969
DVU1970: DVU1970 - response regulator (TIGR), at 2,045,022 to 2,045,429
DVU1970
DORF14650: DORF14650 - no description, at 2,045,502 to 2,045,651
DORF14650
DVU1971: DVU1971 - conserved domain protein (TIGR), at 2,045,894 to 2,046,457
DVU1971
Position (kb)
2044
2045
2046 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2043.358 kb on + strand, within DVU1968 at 2043.358 kb on + strand, within DVU1968 at 2043.390 kb on + strand, within DVU1968 at 2043.440 kb on - strand, within DVU1968 at 2043.630 kb on + strand, within DVU1968 at 2043.706 kb on - strand, within DVU1968 at 2043.720 kb on + strand, within DVU1968 at 2043.787 kb on + strand, within DVU1968 at 2043.908 kb on + strand, within DVU1968 at 2043.987 kb on + strand, within DVU1968 at 2044.054 kb on + strand, within DVU1968 at 2044.054 kb on + strand, within DVU1968 at 2044.088 kb on - strand, within DVU1968 at 2044.141 kb on + strand, within DVU1968 at 2044.165 kb on + strand, within DVU1968 at 2044.181 kb on + strand at 2044.216 kb on - strand at 2044.219 kb on + strand at 2044.221 kb on - strand at 2044.221 kb on - strand at 2044.221 kb on - strand at 2044.442 kb on + strand, within DVU1969 at 2044.481 kb on + strand, within DVU1969 at 2044.511 kb on - strand, within DVU1969 at 2044.548 kb on + strand, within DVU1969 at 2044.574 kb on + strand, within DVU1969 at 2044.609 kb on + strand, within DVU1969 at 2044.683 kb on + strand, within DVU1969 at 2044.721 kb on + strand, within DVU1969 at 2044.756 kb on + strand, within DVU1969 at 2044.806 kb on - strand, within DVU1969 at 2044.806 kb on - strand, within DVU1969 at 2044.861 kb on - strand, within DVU1969 at 2044.956 kb on + strand at 2044.956 kb on + strand at 2044.964 kb on - strand at 2045.008 kb on + strand at 2045.082 kb on + strand, within DVU1970 at 2045.181 kb on + strand, within DVU1970 at 2045.339 kb on - strand, within DVU1970 at 2045.339 kb on - strand, within DVU1970 at 2045.351 kb on + strand, within DVU1970 at 2045.351 kb on + strand, within DVU1970 at 2045.351 kb on + strand, within DVU1970 at 2045.357 kb on - strand, within DVU1970 at 2045.357 kb on - strand, within DVU1970 at 2045.369 kb on - strand, within DVU1970 at 2045.369 kb on - strand, within DVU1970 at 2045.373 kb on + strand, within DVU1970 at 2045.399 kb on + strand at 2045.444 kb on + strand at 2045.525 kb on + strand, within DORF14650 at 2045.601 kb on - strand, within DORF14650 at 2045.626 kb on + strand, within DORF14650 at 2045.644 kb on - strand at 2045.655 kb on - strand at 2045.655 kb on - strand at 2045.689 kb on + strand at 2045.757 kb on + strand at 2045.764 kb on + strand at 2045.796 kb on + strand at 2045.804 kb on + strand at 2045.811 kb on - strand at 2045.867 kb on - strand at 2045.990 kb on - strand, within DVU1971
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Folic with Casamino acids (vit. assay) 0.05% remove 2,043,358 + DVU1968 0.24 -0.3 2,043,358 + DVU1968 0.24 +0.7 2,043,390 + DVU1968 0.26 -1.6 2,043,440 - DVU1968 0.30 +0.6 2,043,630 + DVU1968 0.46 -0.3 2,043,706 - DVU1968 0.52 +1.5 2,043,720 + DVU1968 0.53 -1.7 2,043,787 + DVU1968 0.58 -0.3 2,043,908 + DVU1968 0.68 -0.9 2,043,987 + DVU1968 0.74 +0.7 2,044,054 + DVU1968 0.80 -0.2 2,044,054 + DVU1968 0.80 -0.7 2,044,088 - DVU1968 0.83 +0.6 2,044,141 + DVU1968 0.87 -0.2 2,044,165 + DVU1968 0.89 +0.1 2,044,181 + -0.3 2,044,216 - -1.4 2,044,219 + -0.2 2,044,221 - +1.5 2,044,221 - -0.5 2,044,221 - -0.7 2,044,442 + DVU1969 0.18 -1.2 2,044,481 + DVU1969 0.23 -0.5 2,044,511 - DVU1969 0.28 -0.5 2,044,548 + DVU1969 0.33 -1.2 2,044,574 + DVU1969 0.37 -2.2 2,044,609 + DVU1969 0.42 -1.5 2,044,683 + DVU1969 0.52 -0.5 2,044,721 + DVU1969 0.58 +1.7 2,044,756 + DVU1969 0.63 +1.1 2,044,806 - DVU1969 0.70 -0.9 2,044,806 - DVU1969 0.70 +0.0 2,044,861 - DVU1969 0.78 -0.3 2,044,956 + +0.0 2,044,956 + -0.5 2,044,964 - +0.1 2,045,008 + -0.1 2,045,082 + DVU1970 0.15 -1.2 2,045,181 + DVU1970 0.39 -0.0 2,045,339 - DVU1970 0.78 +0.6 2,045,339 - DVU1970 0.78 -0.7 2,045,351 + DVU1970 0.81 -0.4 2,045,351 + DVU1970 0.81 -0.3 2,045,351 + DVU1970 0.81 -0.3 2,045,357 - DVU1970 0.82 -1.6 2,045,357 - DVU1970 0.82 -0.7 2,045,369 - DVU1970 0.85 -0.2 2,045,369 - DVU1970 0.85 -0.3 2,045,373 + DVU1970 0.86 -1.3 2,045,399 + -1.9 2,045,444 + -0.6 2,045,525 + DORF14650 0.15 +1.0 2,045,601 - DORF14650 0.66 +1.7 2,045,626 + DORF14650 0.83 -0.2 2,045,644 - +0.3 2,045,655 - -0.3 2,045,655 - +1.9 2,045,689 + -0.1 2,045,757 + -0.2 2,045,764 + -0.1 2,045,796 + +0.1 2,045,804 + +0.8 2,045,811 - -0.3 2,045,867 - -1.5 2,045,990 - DVU1971 0.17 -0.2
Or see this region's nucleotide sequence