Experiment: MoLS4 without Folic with Casamino acids (vit. assay) 0.05%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1544 and DORF11799 are separated by 63 nucleotides DORF11799 and DVU1545 are separated by 41 nucleotides
DVU1544: DVU1544 - mechanosensitive ion channel family protein (TIGR), at 1,611,814 to 1,614,237
DVU1544
DORF11799: DORF11799 - no description, at 1,614,301 to 1,614,435
DORF11799
DVU1545: DVU1545 - hemolysin-type calcium-binding repeat/calx-beta domain protein (TIGR), at 1,614,477 to 1,621,721
DVU1545
Position (kb)
1614
1615 Strain fitness (log2 ratio)
-1
0
1
2 at 1613.310 kb on - strand, within DVU1544 at 1613.320 kb on - strand, within DVU1544 at 1613.457 kb on + strand, within DVU1544 at 1613.532 kb on - strand, within DVU1544 at 1613.851 kb on - strand, within DVU1544 at 1614.030 kb on + strand at 1614.076 kb on - strand at 1614.260 kb on + strand at 1614.260 kb on + strand at 1614.298 kb on + strand at 1614.316 kb on - strand, within DORF11799 at 1614.355 kb on + strand, within DORF11799 at 1614.408 kb on - strand, within DORF11799 at 1614.430 kb on + strand at 1614.452 kb on + strand at 1614.469 kb on + strand at 1614.469 kb on + strand at 1614.469 kb on + strand at 1614.469 kb on + strand at 1614.477 kb on - strand at 1614.477 kb on - strand at 1614.477 kb on - strand at 1614.495 kb on + strand at 1614.503 kb on - strand at 1614.620 kb on + strand at 1614.674 kb on - strand at 1614.812 kb on + strand at 1614.813 kb on - strand at 1614.828 kb on - strand at 1614.957 kb on - strand at 1614.995 kb on + strand at 1614.997 kb on + strand at 1615.005 kb on - strand at 1615.005 kb on - strand at 1615.036 kb on - strand at 1615.203 kb on + strand, within DVU1545 at 1615.386 kb on - strand, within DVU1545
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 without Folic with Casamino acids (vit. assay) 0.05% remove 1,613,310 - DVU1544 0.62 -0.4 1,613,320 - DVU1544 0.62 -0.0 1,613,457 + DVU1544 0.68 -0.7 1,613,532 - DVU1544 0.71 -0.6 1,613,851 - DVU1544 0.84 -0.3 1,614,030 + +2.7 1,614,076 - -0.6 1,614,260 + +0.1 1,614,260 + -0.1 1,614,298 + -0.7 1,614,316 - DORF11799 0.11 -0.6 1,614,355 + DORF11799 0.40 -1.1 1,614,408 - DORF11799 0.79 -0.3 1,614,430 + -0.3 1,614,452 + -0.9 1,614,469 + -0.1 1,614,469 + +0.4 1,614,469 + -0.7 1,614,469 + -1.3 1,614,477 - +0.2 1,614,477 - +0.8 1,614,477 - -0.2 1,614,495 + -0.3 1,614,503 - -0.0 1,614,620 + -0.3 1,614,674 - -0.2 1,614,812 + -1.1 1,614,813 - -0.2 1,614,828 - -0.4 1,614,957 - +1.7 1,614,995 + +1.0 1,614,997 + +0.4 1,615,005 - -1.5 1,615,005 - +0.3 1,615,036 - -0.2 1,615,203 + DVU1545 0.10 -0.0 1,615,386 - DVU1545 0.13 +0.5
Or see this region's nucleotide sequence