Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS22950

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
4,791,324	-		BWI76_RS22945	0.10	-0.0
4,791,491	+		BWI76_RS22945	0.25	+0.1
4,791,502	+		BWI76_RS22945	0.26	-0.8
4,791,636	+		BWI76_RS22945	0.38	-1.8
4,791,660	+		BWI76_RS22945	0.41	+0.5
4,792,024	+		BWI76_RS22945	0.74	+0.2
4,792,229	+				-0.2
4,792,393	-		BWI76_RS22950	0.22	-0.8
4,792,436	-		BWI76_RS22950	0.33	-4.5
4,792,704	-				-0.0
4,792,705	-				-0.0
4,792,705	-				+0.3
4,792,805	-				+0.7
4,793,060	+		BWI76_RS22955	0.37	-0.8
4,793,359	+		BWI76_RS22955	0.69	+0.1
4,793,402	-		BWI76_RS22955	0.74	-2.0
4,793,485	+		BWI76_RS22955	0.83	+0.7
4,793,485	+		BWI76_RS22955	0.83	-1.3
4,793,636	-				-1.3