Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20605

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
4,310,796	+		BWI76_RS20600	0.26	+1.0
4,310,804	-		BWI76_RS20600	0.27	+0.6
4,310,811	-		BWI76_RS20600	0.27	-0.6
4,310,842	+		BWI76_RS20600	0.30	-0.6
4,310,849	+		BWI76_RS20600	0.30	+1.0
4,311,241	-		BWI76_RS20600	0.62	+0.6
4,311,241	-		BWI76_RS20600	0.62	+0.8
4,311,255	+		BWI76_RS20600	0.63	-0.3
4,311,263	-		BWI76_RS20600	0.63	-1.1
4,311,371	-		BWI76_RS20600	0.72	-0.1
4,311,498	-		BWI76_RS20600	0.82	-0.2
4,311,500	-		BWI76_RS20600	0.82	-3.5
4,311,512	-		BWI76_RS20600	0.83	+0.5
4,311,514	-		BWI76_RS20600	0.83	+1.6
4,311,524	-		BWI76_RS20600	0.84	-0.3
4,311,640	+				-0.6
4,311,811	+				-0.6
4,311,927	+		BWI76_RS20605	0.17	+1.1
4,312,190	-		BWI76_RS20605	0.49	+0.3
4,312,320	+		BWI76_RS20605	0.64	-0.5
4,312,378	+		BWI76_RS20605	0.71	-0.7
4,312,577	+				+0.3
4,312,621	-				-2.3
4,313,394	-		BWI76_RS20610	0.71	-1.7
4,313,416	+		BWI76_RS20610	0.73	-0.3
4,313,476	+		BWI76_RS20610	0.79	-0.0
4,313,493	-		BWI76_RS20610	0.81	-0.3
4,313,530	-		BWI76_RS20610	0.85	-1.8
4,313,582	+				+1.0
4,313,590	-				+0.8
4,313,602	-				-1.8