Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS20195

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
4,231,087	+		BWI76_RS20185	0.33	+1.0
4,231,302	-				-0.6
4,231,557	+				+0.1
4,231,565	-				-3.3
4,231,591	-				+0.8
4,231,657	-		BWI76_RS20190	0.23	-0.8
4,231,908	+		BWI76_RS20190	0.80	-0.6
4,231,926	-		BWI76_RS20190	0.84	-1.6
4,232,281	-				-0.9
4,232,334	-				+0.8
4,232,434	-				+0.0
4,232,691	-				-0.4
4,232,705	-				-0.4
4,232,874	+		BWI76_RS20200	0.24	+0.3
4,232,962	-		BWI76_RS20200	0.34	+0.6
4,232,962	-		BWI76_RS20200	0.34	+0.9
4,233,128	-		BWI76_RS20200	0.52	+1.6
4,233,134	+		BWI76_RS20200	0.52	-3.3
4,233,135	-		BWI76_RS20200	0.52	-0.0