Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS17255

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
3,576,126	+		BWI76_RS17250	0.73	-0.2
3,576,208	+		BWI76_RS17250	0.76	-0.3
3,576,279	+		BWI76_RS17250	0.79	+0.5
3,576,284	+		BWI76_RS17250	0.79	-0.1
3,576,711	-				-1.3
3,576,797	-				+0.5
3,576,815	+				+0.2
3,576,823	-				-0.7
3,577,054	-				-0.3
3,577,203	-		BWI76_RS17255	0.28	-0.1
3,577,203	-		BWI76_RS17255	0.28	+1.3
3,577,301	-		BWI76_RS17255	0.44	-0.4
3,577,313	-		BWI76_RS17255	0.46	-0.5
3,577,338	+		BWI76_RS17255	0.50	-1.4
3,577,338	+				+3.1
3,577,338	+		BWI76_RS17255	0.50	+0.3
3,577,338	+		BWI76_RS17255	0.50	-2.4
3,577,339	+		BWI76_RS17255	0.50	-0.4
3,577,346	-		BWI76_RS17255	0.51	-0.6
3,577,346	-		BWI76_RS17255	0.51	+0.5
3,577,365	-		BWI76_RS17255	0.55	-2.5
3,577,368	-		BWI76_RS17255	0.55	-0.4
3,577,376	-		BWI76_RS17255	0.56	+0.5
3,577,382	+		BWI76_RS17255	0.57	+2.1
3,577,421	-		BWI76_RS17255	0.64	+0.4
3,577,421	-		BWI76_RS17255	0.64	+0.6
3,577,423	-		BWI76_RS17255	0.64	-0.5
3,577,425	+		BWI76_RS17255	0.64	-1.4
3,577,433	-		BWI76_RS17255	0.66	-0.2
3,577,463	-		BWI76_RS17255	0.70	-1.1
3,577,473	+		BWI76_RS17255	0.72	+1.3
3,577,481	-		BWI76_RS17255	0.73	+0.2
3,577,536	+		BWI76_RS17255	0.82	-1.4
3,577,536	+		BWI76_RS17255	0.82	-0.1
3,577,536	+		BWI76_RS17255	0.82	-1.1
3,577,536	+		BWI76_RS17255	0.82	+0.7
3,577,544	-		BWI76_RS17255	0.83	+1.2
3,577,544	-		BWI76_RS17255	0.83	-1.9
3,577,544	-		BWI76_RS17255	0.83	-0.4
3,577,544	-		BWI76_RS17255	0.83	+0.9
3,577,544	-		BWI76_RS17255	0.83	+0.1
3,577,544	-		BWI76_RS17255	0.83	+1.5
3,577,544	-		BWI76_RS17255	0.83	+0.1
3,577,544	-		BWI76_RS17255	0.83	-0.7
3,577,544	-		BWI76_RS17255	0.83	-0.5
3,577,544	-		BWI76_RS17255	0.83	+2.0
3,577,544	-		BWI76_RS17255	0.83	+0.1
3,577,544	-		BWI76_RS17255	0.83	-0.2
3,577,589	-				+0.2
3,577,593	+				+1.6
3,577,599	-				-0.6
3,577,602	-				+0.5
3,577,623	-				+0.2
3,577,659	-				+0.2
3,577,723	+				+0.2
3,577,728	+				-2.2
3,577,729	-				+0.2
3,577,740	-				-0.2
3,577,757	-				-0.2
3,577,759	-				-0.7
3,577,759	-				+0.6
3,577,773	-				+0.3
3,577,797	+				+0.9
3,577,802	-				-1.0
3,577,805	-				-2.2
3,577,816	-				-0.2
3,577,825	+		BWI76_RS17260	0.11	-1.1
3,577,840	-		BWI76_RS17260	0.16	-1.2
3,577,848	-		BWI76_RS17260	0.18	-0.5
3,577,848	-		BWI76_RS17260	0.18	-1.4
3,577,915	-		BWI76_RS17260	0.39	+0.1
3,577,945	+		BWI76_RS17260	0.49	-1.4
3,577,963	-		BWI76_RS17260	0.54	-0.7
3,577,963	-		BWI76_RS17260	0.54	-1.1
3,577,992	-		BWI76_RS17260	0.63	-0.6
3,578,014	-		BWI76_RS17260	0.70	-0.9
3,578,118	+				+0.6
3,578,119	-				-1.9
3,578,123	+				-0.2
3,578,123	+				-1.7
3,578,522	+		BWI76_RS17265	0.78	-1.7