Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14090

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
2,944,337	+		BWI76_RS14080	0.88	+1.1
2,944,510	+				-1.9
2,944,734	+				+2.5
2,945,332	+				+0.2
2,945,407	-		BWI76_RS14090	0.26	-1.7
2,945,451	-		BWI76_RS14090	0.36	-0.2
2,945,573	-		BWI76_RS14090	0.63	-1.5
2,945,963	+		BWI76_RS14095	0.14	-0.8
2,945,963	+		BWI76_RS14095	0.14	+0.1
2,945,979	+		BWI76_RS14095	0.16	-0.7
2,945,997	-		BWI76_RS14095	0.17	+0.7
2,946,465	-		BWI76_RS14095	0.52	+0.6
2,946,465	-		BWI76_RS14095	0.52	+0.4
2,946,503	+		BWI76_RS14095	0.55	-2.9
2,946,550	+		BWI76_RS14095	0.59	-0.3
2,946,606	+		BWI76_RS14095	0.63	+0.1
2,946,663	-		BWI76_RS14095	0.67	-0.2