Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08945

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
1,882,571	-				-0.1
1,882,576	+				+0.3
1,882,589	+				-2.0
1,882,591	+				+0.3
1,882,661	+				+1.1
1,882,839	+		BWI76_RS08940	0.30	-0.6
1,882,898	+		BWI76_RS08940	0.39	+0.1
1,883,066	-		BWI76_RS08940	0.64	+0.2
1,883,139	+		BWI76_RS08940	0.74	-0.0
1,883,152	+		BWI76_RS08940	0.76	-1.6
1,883,177	-		BWI76_RS08940	0.80	-0.8
1,883,457	-				-1.0
1,883,539	+				+1.2
1,883,685	+		BWI76_RS08945	0.14	+0.4
1,883,730	+		BWI76_RS08945	0.16	+0.1
1,883,954	+		BWI76_RS08945	0.26	+0.8
1,884,583	+		BWI76_RS08945	0.54	+0.3
1,884,664	+		BWI76_RS08945	0.57	+0.9
1,885,862	+				+0.5
1,886,031	-		BWI76_RS08950	0.14	+1.8
1,886,102	-		BWI76_RS08950	0.26	+0.2
1,886,131	-		BWI76_RS08950	0.31	+2.1
1,886,365	+		BWI76_RS08950	0.69	+0.2
1,886,439	+		BWI76_RS08950	0.81	+0.8