Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS05745

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 6 x
1,207,050	+		BWI76_RS05730	0.79	+0.2
1,207,050	+		BWI76_RS05730	0.79	-0.4
1,207,060	-		BWI76_RS05730	0.80	-0.7
1,207,101	-		BWI76_RS05730	0.86	+0.6
1,207,102	+		BWI76_RS05730	0.86	-3.4
1,207,110	-		BWI76_RS05730	0.87	-1.2
1,207,235	+				-0.1
1,207,241	+				-0.0
1,207,248	+				+0.3
1,207,256	-				-0.1
1,207,373	+		BWI76_RS05735	0.18	-0.0
1,207,449	+		BWI76_RS05735	0.38	-0.2
1,207,503	+		BWI76_RS05735	0.53	+0.1
1,207,503	+		BWI76_RS05735	0.53	+0.4
1,207,511	-		BWI76_RS05735	0.55	+1.0
1,207,551	-		BWI76_RS05735	0.66	-2.0
1,207,556	+		BWI76_RS05735	0.67	-0.2
1,207,566	+		BWI76_RS05735	0.70	-0.1
1,207,586	+		BWI76_RS05735	0.76	-1.7
1,207,588	+		BWI76_RS05735	0.76	-0.6
1,207,593	+		BWI76_RS05735	0.78	-1.0
1,207,598	+		BWI76_RS05735	0.79	+0.4
1,207,598	+		BWI76_RS05735	0.79	-0.9
1,207,598	+		BWI76_RS05735	0.79	-0.6
1,207,601	-		BWI76_RS05735	0.80	-0.4
1,207,603	+		BWI76_RS05735	0.80	-0.3
1,207,606	-		BWI76_RS05735	0.81	-0.0
1,207,618	-		BWI76_RS05735	0.84	+0.1
1,207,654	+				+0.6
1,207,659	+				-0.6
1,207,659	+				-0.9
1,207,667	-				-1.6
1,207,667	-				+0.2
1,207,667	-				+1.0
1,207,678	-				+1.3
1,207,701	-		BWI76_RS05740	0.16	+0.1
1,207,744	+		BWI76_RS05740	0.35	-2.0
1,207,768	+		BWI76_RS05740	0.45	+0.4
1,207,775	+		BWI76_RS05740	0.48	+0.3
1,207,775	+		BWI76_RS05740	0.48	+0.1
1,207,811	-		BWI76_RS05740	0.63	+0.0
1,207,839	-		BWI76_RS05740	0.75	+1.2
1,207,839	-		BWI76_RS05740	0.75	+0.2
1,208,008	+				+0.1
1,209,263	+				-0.6
1,209,461	+		BWI76_RS05750	0.16	-2.5
1,209,473	+		BWI76_RS05750	0.17	+0.3
1,209,473	+		BWI76_RS05750	0.17	-0.6
1,209,481	-		BWI76_RS05750	0.18	-2.0
1,209,481	-		BWI76_RS05750	0.18	-0.4
1,209,481	-		BWI76_RS05750	0.18	-0.2
1,209,610	+		BWI76_RS05750	0.37	-0.8
1,209,616	-		BWI76_RS05750	0.38	-0.2
1,209,639	+		BWI76_RS05750	0.41	-1.4
1,209,703	+		BWI76_RS05750	0.50	+0.5
1,209,736	+		BWI76_RS05750	0.55	-0.1
1,209,817	+		BWI76_RS05750	0.67	-0.2
1,209,820	-		BWI76_RS05750	0.67	+1.7
1,209,825	-		BWI76_RS05750	0.68	-2.3
1,209,870	-		BWI76_RS05750	0.74	-0.0
1,209,921	-		BWI76_RS05750	0.82	+0.7
1,209,967	-		BWI76_RS05750	0.88	-1.6
1,209,994	+				-0.2
1,209,994	+				+0.2
1,210,012	+				-0.7
1,210,012	+				+0.3
1,210,012	+				-0.5
1,210,020	-				-3.5
1,210,105	+				-0.0
1,210,107	+				-0.1
1,210,113	-				+0.1
1,210,116	+				+0.4
1,210,131	+				+1.0
1,210,139	-				+0.4
1,210,175	-				-2.6
1,210,280	-				-0.7