Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS27850

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
5,775,268	+		BWI76_RS27845	0.40	-0.3
5,775,370	+		BWI76_RS27845	0.48	+0.0
5,775,378	-		BWI76_RS27845	0.49	+0.5
5,775,403	-		BWI76_RS27845	0.51	-0.0
5,775,513	-		BWI76_RS27845	0.60	-0.8
5,776,186	-				-0.3
5,776,308	+				+0.0
5,776,323	+		BWI76_RS27850	0.10	-1.0
5,776,503	+		BWI76_RS27850	0.30	+0.0
5,776,799	+		BWI76_RS27850	0.62	+0.4
5,776,804	+		BWI76_RS27850	0.62	+1.1
5,776,804	+		BWI76_RS27850	0.62	-0.7
5,776,812	-		BWI76_RS27850	0.63	+0.5
5,777,023	+		BWI76_RS27850	0.86	+4.7
5,777,089	+				-1.7
5,777,410	+				-0.2
5,777,410	+				+1.0
5,777,418	-				-3.4
5,777,425	+				+0.6
5,777,442	-				+0.6
5,777,521	-		BWI76_RS27855	0.11	+1.6
5,777,666	+		BWI76_RS27855	0.21	+0.4
5,777,828	-		BWI76_RS27855	0.33	+0.6
5,777,997	+		BWI76_RS27855	0.46	-0.1
5,778,075	+				+0.8
5,778,075	+		BWI76_RS27855	0.52	+1.0
5,778,075	+		BWI76_RS27855	0.52	-0.2
5,778,075	+		BWI76_RS27855	0.52	-1.1
5,778,098	+		BWI76_RS27855	0.54	+0.5