Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS21000

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
4,391,642	+		BWI76_RS20995	0.67	-0.1
4,392,555	-		BWI76_RS21000	0.16	-1.1
4,392,635	+		BWI76_RS21000	0.21	-0.1
4,393,187	-		BWI76_RS21000	0.57	+0.6
4,393,289	+		BWI76_RS21000	0.63	-0.1
4,393,289	+		BWI76_RS21000	0.63	-1.1
4,393,367	+		BWI76_RS21000	0.68	-0.6
4,393,395	+		BWI76_RS21000	0.70	+1.2
4,393,662	-		BWI76_RS21000	0.87	-0.7
4,393,692	-		BWI76_RS21000	0.89	-1.0
4,393,716	+				+0.7
4,393,832	+				+0.9
4,393,878	-				-0.7
4,393,947	-				+0.7
4,393,948	-				-0.4
4,393,953	-				-1.4
4,393,964	-				-0.3
4,394,078	+				-2.4
4,394,079	-				-0.7
4,394,195	-		BWI76_RS21005	0.14	+0.1
4,394,460	+		BWI76_RS21005	0.25	-1.4
4,394,568	-		BWI76_RS21005	0.30	-0.6
4,394,572	+		BWI76_RS21005	0.30	+0.3
4,394,736	-		BWI76_RS21005	0.38	-1.7
4,394,799	-		BWI76_RS21005	0.41	+0.1
4,394,799	-		BWI76_RS21005	0.41	-0.6
4,394,810	+		BWI76_RS21005	0.41	-0.2