Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS11935

Experiment: RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma virens G41 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1 x and Iron (II) 0.002 mg/ml
2,512,580	-				-0.2
2,512,681	+				+0.3
2,512,860	+		BWI76_RS11935	0.49	+0.5
2,512,871	+		BWI76_RS11935	0.56	+0.1
2,512,893	+		BWI76_RS11935	0.69	+0.1
2,512,904	+		BWI76_RS11935	0.76	-1.6
2,512,904	+				+0.7
2,512,910	+		BWI76_RS11935	0.79	-0.0
2,512,949	+				-0.7
2,513,077	+				+0.9
2,513,131	-				+0.4
2,513,148	+				+1.3
2,513,151	+				-0.1
2,513,156	-				+0.4
2,513,159	-				+1.0
2,513,159	-				+0.1
2,513,159	-				+0.4
2,513,159	-				+0.2
2,513,159	-				-0.4
2,513,164	-				+0.3
2,513,173	-				+0.8
2,513,174	+				-0.8
2,513,174	-				+0.4
2,513,174	-				-0.3
2,513,174	-				-0.2
2,513,220	+				+0.4
2,513,234	-				-0.2
2,513,301	+				+0.1
2,513,310	-				+0.2
2,513,324	+				-0.3
2,513,326	-				-0.2
2,513,331	-				-1.3
2,513,332	-				+0.3
2,513,357	-				-0.3
2,513,380	+				-0.7
2,513,468	+				-0.2
2,513,889	+		BWI76_RS11940	0.21	+0.1