Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1688 and Psest_1689 are separated by 192 nucleotides Psest_1689 and Psest_1690 are separated by 172 nucleotides Psest_1690 and Psest_1691 overlap by 4 nucleotides Psest_1691 and Psest_1692 overlap by 4 nucleotides
Psest_1688: Psest_1688 - 3-oxoacyl-(acyl-carrier-protein) reductase, at 1,796,337 to 1,797,080
_1688
Psest_1689: Psest_1689 - acyl carrier protein, at 1,797,273 to 1,797,509
_1689
Psest_1690: Psest_1690 - beta-ketoacyl-acyl-carrier-protein synthase II, at 1,797,682 to 1,798,926
_1690
Psest_1691: Psest_1691 - aminodeoxychorismate lyase, at 1,798,923 to 1,799,744
_1691
Psest_1692: Psest_1692 - conserved hypothetical protein, YceG family, at 1,799,741 to 1,800,811
_1692
Position (kb)
1797
1798
1799 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.069 kb on + strand at 1797.126 kb on + strand at 1797.126 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.130 kb on + strand at 1797.132 kb on + strand at 1797.132 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.217 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.219 kb on + strand at 1797.507 kb on + strand at 1797.514 kb on + strand at 1797.662 kb on + strand at 1797.666 kb on + strand at 1797.666 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1797.668 kb on + strand at 1798.955 kb on + strand at 1798.957 kb on + strand at 1799.027 kb on + strand, within Psest_1691 at 1799.028 kb on - strand, within Psest_1691 at 1799.423 kb on + strand, within Psest_1691 at 1799.423 kb on + strand, within Psest_1691 at 1799.640 kb on + strand, within Psest_1691 at 1799.640 kb on + strand, within Psest_1691
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,797,069 + -3.1 1,797,069 + -0.2 1,797,069 + -0.9 1,797,069 + -2.4 1,797,069 + -2.4 1,797,069 + -3.0 1,797,069 + -0.5 1,797,069 + -1.6 1,797,069 + -0.3 1,797,069 + -1.2 1,797,069 + +1.2 1,797,069 + +0.8 1,797,069 + -1.8 1,797,126 + -0.1 1,797,126 + +1.3 1,797,130 + -1.7 1,797,130 + +0.8 1,797,130 + -2.9 1,797,130 + +1.0 1,797,132 + -1.0 1,797,132 + -0.1 1,797,217 + -1.5 1,797,217 + +0.2 1,797,217 + -0.7 1,797,217 + +1.6 1,797,217 + -2.0 1,797,219 + -0.9 1,797,219 + -1.8 1,797,219 + -1.5 1,797,219 + +1.1 1,797,219 + +0.8 1,797,507 + +2.5 1,797,514 + +0.1 1,797,662 + -1.3 1,797,666 + -1.2 1,797,666 + +0.7 1,797,668 + +0.8 1,797,668 + +1.0 1,797,668 + +3.1 1,797,668 + -1.4 1,797,668 + -0.6 1,798,955 + +1.1 1,798,957 + +0.2 1,799,027 + Psest_1691 0.13 -0.4 1,799,028 - Psest_1691 0.13 -1.1 1,799,423 + Psest_1691 0.61 -1.2 1,799,423 + Psest_1691 0.61 +0.5 1,799,640 + Psest_1691 0.87 -0.3 1,799,640 + Psest_1691 0.87 -0.1
Or see this region's nucleotide sequence