Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2653 and Psest_2654 are separated by 18 nucleotides Psest_2654 and Psest_2655 are separated by 441 nucleotides
Psest_2653: Psest_2653 - fatty oxidation complex, beta subunit FadA, at 2,835,454 to 2,836,629
_2653
Psest_2654: Psest_2654 - fatty oxidation complex, alpha subunit FadB, at 2,836,648 to 2,838,795
_2654
Psest_2655: Psest_2655 - Protease II, at 2,839,237 to 2,841,267
_2655
Position (kb)
2836
2837
2838
2839 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2836.655 kb on + strand at 2836.656 kb on - strand at 2836.656 kb on - strand at 2838.936 kb on - strand at 2839.081 kb on + strand at 2839.081 kb on + strand at 2839.082 kb on - strand at 2839.082 kb on - strand at 2839.082 kb on - strand at 2839.082 kb on - strand at 2839.149 kb on + strand at 2839.149 kb on + strand at 2839.150 kb on - strand at 2839.155 kb on + strand at 2839.167 kb on + strand at 2839.188 kb on - strand at 2839.324 kb on + strand at 2839.345 kb on + strand at 2839.345 kb on + strand at 2839.346 kb on - strand at 2839.462 kb on + strand, within Psest_2655 at 2839.462 kb on + strand, within Psest_2655 at 2839.462 kb on + strand, within Psest_2655 at 2839.463 kb on - strand, within Psest_2655 at 2839.463 kb on - strand, within Psest_2655 at 2839.463 kb on - strand, within Psest_2655 at 2839.463 kb on - strand, within Psest_2655 at 2839.463 kb on - strand, within Psest_2655 at 2839.678 kb on + strand, within Psest_2655 at 2839.784 kb on - strand, within Psest_2655 at 2839.784 kb on - strand, within Psest_2655 at 2839.784 kb on - strand, within Psest_2655
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,836,655 + -0.8 2,836,656 - -1.2 2,836,656 - -2.5 2,838,936 - +1.2 2,839,081 + -1.5 2,839,081 + +0.1 2,839,082 - +1.4 2,839,082 - -0.2 2,839,082 - +1.7 2,839,082 - -1.6 2,839,149 + +0.7 2,839,149 + +1.0 2,839,150 - -0.3 2,839,155 + +0.7 2,839,167 + -0.4 2,839,188 - +2.2 2,839,324 + +1.7 2,839,345 + -1.1 2,839,345 + +0.7 2,839,346 - -0.5 2,839,462 + Psest_2655 0.11 +0.3 2,839,462 + Psest_2655 0.11 +0.8 2,839,462 + Psest_2655 0.11 -0.0 2,839,463 - Psest_2655 0.11 +0.5 2,839,463 - Psest_2655 0.11 +0.7 2,839,463 - Psest_2655 0.11 +0.9 2,839,463 - Psest_2655 0.11 +0.6 2,839,463 - Psest_2655 0.11 -0.6 2,839,678 + Psest_2655 0.22 -0.1 2,839,784 - Psest_2655 0.27 +0.1 2,839,784 - Psest_2655 0.27 +0.9 2,839,784 - Psest_2655 0.27 +0.7
Or see this region's nucleotide sequence