Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1837 and Psest_1838 are separated by 131 nucleotides Psest_1838 and Psest_1839 are separated by 13 nucleotides Psest_1839 and Psest_1840 are separated by 157 nucleotides
Psest_1837: Psest_1837 - Endoglucanase, at 1,939,319 to 1,940,398
_1837
Psest_1838: Psest_1838 - capsular exopolysaccharide family, at 1,940,530 to 1,942,746
_1838
Psest_1839: Psest_1839 - Protein-tyrosine-phosphatase, at 1,942,760 to 1,943,197
_1839
Psest_1840: Psest_1840 - Undecaprenyl-phosphate glucose phosphotransferase, at 1,943,355 to 1,944,782
_1840
Position (kb)
1940
1941
1942
1943 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1939.620 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.663 kb on - strand, within Psest_1837 at 1939.705 kb on - strand, within Psest_1837 at 1939.957 kb on - strand, within Psest_1837 at 1939.957 kb on - strand, within Psest_1837 at 1939.957 kb on - strand, within Psest_1837 at 1939.957 kb on - strand, within Psest_1837 at 1939.966 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.011 kb on - strand, within Psest_1837 at 1940.175 kb on + strand, within Psest_1837 at 1940.176 kb on - strand, within Psest_1837 at 1940.176 kb on - strand, within Psest_1837 at 1940.206 kb on - strand, within Psest_1837 at 1940.206 kb on - strand, within Psest_1837 at 1940.206 kb on - strand, within Psest_1837 at 1940.410 kb on - strand at 1940.410 kb on - strand at 1940.453 kb on + strand at 1940.454 kb on - strand at 1940.454 kb on - strand at 1940.456 kb on + strand at 1940.457 kb on - strand at 1940.562 kb on - strand at 1940.562 kb on - strand at 1940.562 kb on - strand at 1943.281 kb on - strand at 1943.359 kb on + strand at 1943.359 kb on + strand at 1943.359 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.407 kb on + strand at 1943.408 kb on - strand at 1943.408 kb on - strand at 1943.408 kb on - strand at 1943.408 kb on - strand at 1943.408 kb on - strand at 1943.408 kb on - strand at 1943.408 kb on - strand at 1943.440 kb on + strand at 1943.440 kb on + strand at 1943.440 kb on + strand at 1943.440 kb on + strand at 1943.440 kb on + strand at 1943.440 kb on + strand at 1943.441 kb on - strand at 1943.441 kb on - strand at 1943.557 kb on + strand, within Psest_1840 at 1943.557 kb on + strand, within Psest_1840 at 1943.558 kb on - strand, within Psest_1840 at 1943.558 kb on - strand, within Psest_1840
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 1,939,620 - Psest_1837 0.28 -0.7 1,939,663 - Psest_1837 0.32 +2.1 1,939,663 - Psest_1837 0.32 +0.8 1,939,663 - Psest_1837 0.32 +0.8 1,939,663 - Psest_1837 0.32 -1.1 1,939,663 - Psest_1837 0.32 +2.1 1,939,663 - Psest_1837 0.32 +0.4 1,939,663 - Psest_1837 0.32 -1.6 1,939,705 - Psest_1837 0.36 +0.5 1,939,957 - Psest_1837 0.59 -0.3 1,939,957 - Psest_1837 0.59 +0.4 1,939,957 - Psest_1837 0.59 -0.3 1,939,957 - Psest_1837 0.59 +0.4 1,939,966 - Psest_1837 0.60 -0.3 1,940,011 - Psest_1837 0.64 -0.2 1,940,011 - Psest_1837 0.64 +0.2 1,940,011 - Psest_1837 0.64 +0.2 1,940,011 - Psest_1837 0.64 -0.3 1,940,011 - Psest_1837 0.64 +0.3 1,940,011 - Psest_1837 0.64 +1.1 1,940,011 - Psest_1837 0.64 +3.0 1,940,175 + Psest_1837 0.79 +1.2 1,940,176 - Psest_1837 0.79 -0.9 1,940,176 - Psest_1837 0.79 -0.3 1,940,206 - Psest_1837 0.82 -0.7 1,940,206 - Psest_1837 0.82 -0.5 1,940,206 - Psest_1837 0.82 -0.2 1,940,410 - +0.4 1,940,410 - +0.3 1,940,453 + +0.8 1,940,454 - -2.2 1,940,454 - -1.9 1,940,456 + -0.6 1,940,457 - +0.5 1,940,562 - +1.3 1,940,562 - +1.3 1,940,562 - +0.6 1,943,281 - -2.3 1,943,359 + +3.0 1,943,359 + +3.2 1,943,359 + +3.0 1,943,407 + +2.5 1,943,407 + +3.1 1,943,407 + +3.4 1,943,407 + +3.4 1,943,407 + +3.0 1,943,407 + +3.0 1,943,407 + +3.3 1,943,407 + +3.1 1,943,407 + +3.5 1,943,407 + +3.2 1,943,408 - +3.1 1,943,408 - +3.3 1,943,408 - +3.3 1,943,408 - +3.0 1,943,408 - +2.7 1,943,408 - +3.1 1,943,408 - +3.3 1,943,440 + +3.2 1,943,440 + +3.3 1,943,440 + +3.0 1,943,440 + +3.3 1,943,440 + +3.2 1,943,440 + +2.9 1,943,441 - +2.8 1,943,441 - +3.3 1,943,557 + Psest_1840 0.14 +3.2 1,943,557 + Psest_1840 0.14 +3.2 1,943,558 - Psest_1840 0.14 +3.1 1,943,558 - Psest_1840 0.14 +3.1
Or see this region's nucleotide sequence