Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0280 and Psest_0281 are separated by 128 nucleotides Psest_0281 and Psest_0282 are separated by 276 nucleotides Psest_0282 and Psest_0283 are separated by 9 nucleotides
Psest_0280: Psest_0280 - homoserine O-acetyltransferase, at 294,643 to 295,782
_0280
Psest_0281: Psest_0281 - Dynamin family., at 295,911 to 297,872
_0281
Psest_0282: Psest_0282 - Predicted integral membrane protein, at 298,149 to 298,739
_0282
Psest_0283: Psest_0283 - pyrroline-5-carboxylate reductase, at 298,749 to 299,573
_0283
Position (kb) 295
296
297
298 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 294.932 kb on + strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.933 kb on - strand, within Psest_0280 at 294.937 kb on - strand, within Psest_0280 at 294.937 kb on - strand, within Psest_0280 at 294.937 kb on - strand, within Psest_0280 at 294.983 kb on + strand, within Psest_0280 at 294.984 kb on - strand, within Psest_0280 at 294.984 kb on - strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.019 kb on + strand, within Psest_0280 at 295.020 kb on - strand, within Psest_0280 at 295.082 kb on + strand, within Psest_0280 at 295.083 kb on - strand, within Psest_0280 at 295.083 kb on - strand, within Psest_0280 at 295.419 kb on - strand, within Psest_0280 at 295.512 kb on + strand, within Psest_0280 at 295.512 kb on + strand, within Psest_0280 at 295.512 kb on + strand, within Psest_0280 at 295.513 kb on - strand, within Psest_0280 at 295.513 kb on - strand, within Psest_0280 at 295.513 kb on - strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.516 kb on + strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.517 kb on - strand, within Psest_0280 at 295.560 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.658 kb on + strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.659 kb on - strand, within Psest_0280 at 295.668 kb on - strand, within Psest_0280 at 295.668 kb on - strand, within Psest_0280 at 295.826 kb on - strand at 296.399 kb on - strand, within Psest_0281 at 296.757 kb on + strand, within Psest_0281 at 296.757 kb on + strand, within Psest_0281 at 296.757 kb on + strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.758 kb on - strand, within Psest_0281 at 296.797 kb on - strand, within Psest_0281 at 296.802 kb on + strand, within Psest_0281 at 296.802 kb on + strand, within Psest_0281 at 296.802 kb on + strand, within Psest_0281 at 296.803 kb on - strand, within Psest_0281 at 296.898 kb on + strand, within Psest_0281 at 296.899 kb on - strand, within Psest_0281 at 296.952 kb on + strand, within Psest_0281 at 296.953 kb on - strand, within Psest_0281 at 296.953 kb on - strand, within Psest_0281 at 297.441 kb on + strand, within Psest_0281 at 297.442 kb on - strand, within Psest_0281 at 297.550 kb on + strand, within Psest_0281 at 297.550 kb on + strand, within Psest_0281 at 297.550 kb on + strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.551 kb on - strand, within Psest_0281 at 297.637 kb on + strand, within Psest_0281 at 297.637 kb on + strand, within Psest_0281 at 297.637 kb on + strand, within Psest_0281 at 297.638 kb on - strand, within Psest_0281 at 297.638 kb on - strand, within Psest_0281 at 297.638 kb on - strand, within Psest_0281 at 297.724 kb on - strand at 297.724 kb on - strand at 297.841 kb on + strand at 297.841 kb on + strand at 297.841 kb on + strand at 297.908 kb on - strand at 298.073 kb on + strand at 298.073 kb on + strand at 298.073 kb on + strand at 298.073 kb on + strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.074 kb on - strand at 298.077 kb on + strand at 298.077 kb on + strand at 298.077 kb on + strand at 298.078 kb on - strand at 298.078 kb on - strand at 298.078 kb on - strand at 298.078 kb on - strand at 298.155 kb on - strand at 298.630 kb on + strand, within Psest_0282
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 294,932 + Psest_0280 0.25 -3.6 294,933 - Psest_0280 0.25 -1.4 294,933 - Psest_0280 0.25 -1.5 294,933 - Psest_0280 0.25 -0.2 294,933 - Psest_0280 0.25 -4.0 294,933 - Psest_0280 0.25 -5.2 294,933 - Psest_0280 0.25 -3.1 294,937 - Psest_0280 0.26 -3.5 294,937 - Psest_0280 0.26 -2.9 294,937 - Psest_0280 0.26 -2.4 294,983 + Psest_0280 0.30 -1.1 294,984 - Psest_0280 0.30 -1.6 294,984 - Psest_0280 0.30 -5.1 295,019 + Psest_0280 0.33 -3.1 295,019 + Psest_0280 0.33 -1.6 295,019 + Psest_0280 0.33 -4.2 295,019 + Psest_0280 0.33 -3.1 295,020 - Psest_0280 0.33 -3.4 295,082 + Psest_0280 0.39 -0.2 295,083 - Psest_0280 0.39 -1.9 295,083 - Psest_0280 0.39 -3.2 295,419 - Psest_0280 0.68 -2.5 295,512 + Psest_0280 0.76 -4.1 295,512 + Psest_0280 0.76 -4.4 295,512 + Psest_0280 0.76 -1.7 295,513 - Psest_0280 0.76 -0.9 295,513 - Psest_0280 0.76 -1.4 295,513 - Psest_0280 0.76 -2.9 295,516 + Psest_0280 0.77 -4.7 295,516 + Psest_0280 0.77 -4.2 295,516 + Psest_0280 0.77 -1.4 295,516 + Psest_0280 0.77 -3.9 295,516 + Psest_0280 0.77 -2.7 295,516 + Psest_0280 0.77 -2.8 295,516 + Psest_0280 0.77 -3.0 295,516 + Psest_0280 0.77 -4.7 295,516 + Psest_0280 0.77 -4.1 295,516 + Psest_0280 0.77 -1.9 295,516 + Psest_0280 0.77 -2.0 295,517 - Psest_0280 0.77 -1.9 295,517 - Psest_0280 0.77 -4.5 295,517 - Psest_0280 0.77 -5.1 295,517 - Psest_0280 0.77 +1.3 295,517 - Psest_0280 0.77 -1.7 295,560 + Psest_0280 0.80 -1.1 295,658 + Psest_0280 0.89 -2.7 295,658 + Psest_0280 0.89 +1.8 295,658 + Psest_0280 0.89 -1.2 295,658 + Psest_0280 0.89 -3.1 295,658 + Psest_0280 0.89 -3.8 295,659 - Psest_0280 0.89 -0.4 295,659 - Psest_0280 0.89 -3.6 295,659 - Psest_0280 0.89 +1.8 295,659 - Psest_0280 0.89 -3.1 295,659 - Psest_0280 0.89 -4.1 295,659 - Psest_0280 0.89 -2.2 295,659 - Psest_0280 0.89 -1.4 295,668 - Psest_0280 0.90 -1.2 295,668 - Psest_0280 0.90 -2.8 295,826 - +1.1 296,399 - Psest_0281 0.25 -0.8 296,757 + Psest_0281 0.43 -0.0 296,757 + Psest_0281 0.43 -2.1 296,757 + Psest_0281 0.43 -0.2 296,758 - Psest_0281 0.43 -1.6 296,758 - Psest_0281 0.43 -2.2 296,758 - Psest_0281 0.43 -2.1 296,758 - Psest_0281 0.43 -0.9 296,758 - Psest_0281 0.43 -2.4 296,758 - Psest_0281 0.43 +1.0 296,758 - Psest_0281 0.43 +0.8 296,758 - Psest_0281 0.43 -1.4 296,797 - Psest_0281 0.45 +0.3 296,802 + Psest_0281 0.45 -2.0 296,802 + Psest_0281 0.45 +0.8 296,802 + Psest_0281 0.45 +0.8 296,803 - Psest_0281 0.45 -0.8 296,898 + Psest_0281 0.50 -1.6 296,899 - Psest_0281 0.50 -1.5 296,952 + Psest_0281 0.53 -0.5 296,953 - Psest_0281 0.53 -1.1 296,953 - Psest_0281 0.53 -2.1 297,441 + Psest_0281 0.78 -0.7 297,442 - Psest_0281 0.78 -0.6 297,550 + Psest_0281 0.84 -1.3 297,550 + Psest_0281 0.84 +1.8 297,550 + Psest_0281 0.84 -0.2 297,551 - Psest_0281 0.84 -0.6 297,551 - Psest_0281 0.84 -3.2 297,551 - Psest_0281 0.84 -0.7 297,551 - Psest_0281 0.84 -1.4 297,551 - Psest_0281 0.84 -0.3 297,551 - Psest_0281 0.84 +0.0 297,637 + Psest_0281 0.88 +1.2 297,637 + Psest_0281 0.88 +0.4 297,637 + Psest_0281 0.88 -0.2 297,638 - Psest_0281 0.88 -1.5 297,638 - Psest_0281 0.88 -0.8 297,638 - Psest_0281 0.88 -1.2 297,724 - -1.1 297,724 - -0.8 297,841 + -0.6 297,841 + -1.7 297,841 + +0.1 297,908 - +0.6 298,073 + +1.0 298,073 + +1.1 298,073 + +1.1 298,073 + +0.9 298,074 - +0.7 298,074 - +0.8 298,074 - +1.2 298,074 - +0.6 298,074 - +0.2 298,074 - +0.3 298,074 - -0.8 298,074 - +0.1 298,077 + -2.2 298,077 + -0.1 298,077 + -0.4 298,078 - -0.2 298,078 - +0.3 298,078 - +0.7 298,078 - +0.1 298,155 - +3.3 298,630 + Psest_0282 0.81 +0.8
Or see this region's nucleotide sequence