Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4232 and Psest_4233 are separated by 350 nucleotides Psest_4233 and Psest_4234 are separated by 12 nucleotides
Psest_4232: Psest_4232 - Sugar phosphate permease, at 4,413,158 to 4,414,516
_4232
Psest_4233: Psest_4233 - Acyl-CoA dehydrogenases, at 4,414,867 to 4,416,009
_4233
Psest_4234: Psest_4234 - Acyl-CoA dehydrogenases, at 4,416,022 to 4,417,218
_4234
Position (kb)
4414
4415
4416
4417 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4414.130 kb on + strand, within Psest_4232 at 4414.130 kb on + strand, within Psest_4232 at 4414.268 kb on + strand, within Psest_4232 at 4414.268 kb on + strand, within Psest_4232 at 4414.268 kb on + strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.364 kb on + strand, within Psest_4232 at 4414.539 kb on - strand at 4414.539 kb on - strand at 4414.555 kb on + strand at 4414.618 kb on + strand at 4414.618 kb on + strand at 4414.640 kb on - strand at 4414.640 kb on - strand at 4414.743 kb on - strand at 4414.770 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.892 kb on + strand at 4414.892 kb on + strand at 4414.892 kb on + strand at 4414.893 kb on - strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.971 kb on - strand at 4414.971 kb on - strand at 4414.971 kb on - strand at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.225 kb on + strand, within Psest_4233 at 4415.225 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.616 kb on - strand, within Psest_4233 at 4416.023 kb on + strand at 4416.024 kb on - strand at 4416.107 kb on + strand at 4416.107 kb on + strand at 4416.107 kb on + strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.132 kb on - strand at 4416.132 kb on - strand at 4416.158 kb on + strand, within Psest_4234 at 4416.159 kb on - strand, within Psest_4234 at 4416.228 kb on + strand, within Psest_4234 at 4416.228 kb on + strand, within Psest_4234 at 4416.229 kb on - strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.504 kb on - strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.768 kb on - strand, within Psest_4234 at 4416.871 kb on - strand, within Psest_4234 at 4416.881 kb on + strand, within Psest_4234 at 4416.882 kb on - strand, within Psest_4234
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 4,413,951 - Psest_4232 0.58 +0.8 4,413,951 - Psest_4232 0.58 -0.7 4,413,951 - Psest_4232 0.58 -1.3 4,413,951 - Psest_4232 0.58 -1.2 4,413,951 - Psest_4232 0.58 -0.7 4,414,130 + Psest_4232 0.72 -0.2 4,414,130 + Psest_4232 0.72 +0.5 4,414,268 + Psest_4232 0.82 -0.0 4,414,268 + Psest_4232 0.82 -0.4 4,414,268 + Psest_4232 0.82 +0.7 4,414,269 - Psest_4232 0.82 -0.4 4,414,269 - Psest_4232 0.82 -2.2 4,414,269 - Psest_4232 0.82 +0.9 4,414,269 - Psest_4232 0.82 +0.0 4,414,269 - Psest_4232 0.82 -3.4 4,414,364 + Psest_4232 0.89 -0.4 4,414,539 - -0.4 4,414,539 - -1.1 4,414,555 + +0.5 4,414,618 + -1.9 4,414,618 + +0.3 4,414,640 - -0.1 4,414,640 - -1.0 4,414,743 - +0.3 4,414,770 + -0.8 4,414,847 + +0.3 4,414,847 + -0.3 4,414,847 + -1.3 4,414,847 + -0.5 4,414,847 + +0.2 4,414,847 + -0.1 4,414,847 + -0.8 4,414,847 + -0.9 4,414,847 + -0.3 4,414,847 + -0.1 4,414,847 + +0.4 4,414,847 + -1.2 4,414,848 - +1.0 4,414,848 - +1.5 4,414,848 - -0.5 4,414,848 - -1.7 4,414,848 - +0.4 4,414,848 - +1.1 4,414,848 - -0.4 4,414,892 + -1.1 4,414,892 + -0.9 4,414,892 + +0.1 4,414,893 - +2.5 4,414,970 + -0.0 4,414,970 + +1.0 4,414,970 + +1.6 4,414,970 + -0.4 4,414,970 + +0.4 4,414,970 + -0.8 4,414,970 + -2.1 4,414,971 - +0.1 4,414,971 - -0.3 4,414,971 - +0.1 4,415,048 + Psest_4233 0.16 +0.1 4,415,048 + Psest_4233 0.16 -0.1 4,415,048 + Psest_4233 0.16 -1.3 4,415,048 + Psest_4233 0.16 -0.8 4,415,048 + Psest_4233 0.16 -0.6 4,415,048 + Psest_4233 0.16 +0.5 4,415,048 + Psest_4233 0.16 +0.5 4,415,048 + Psest_4233 0.16 +1.0 4,415,048 + Psest_4233 0.16 -1.0 4,415,048 + Psest_4233 0.16 +0.6 4,415,048 + Psest_4233 0.16 +0.2 4,415,048 + Psest_4233 0.16 +0.5 4,415,048 + Psest_4233 0.16 +0.7 4,415,048 + Psest_4233 0.16 +0.1 4,415,049 - Psest_4233 0.16 +1.4 4,415,049 - Psest_4233 0.16 +0.5 4,415,049 - Psest_4233 0.16 +1.1 4,415,049 - Psest_4233 0.16 +0.6 4,415,049 - Psest_4233 0.16 -0.8 4,415,049 - Psest_4233 0.16 +0.2 4,415,049 - Psest_4233 0.16 -0.1 4,415,049 - Psest_4233 0.16 -1.1 4,415,049 - Psest_4233 0.16 -0.9 4,415,049 - Psest_4233 0.16 -0.1 4,415,049 - Psest_4233 0.16 +1.8 4,415,049 - Psest_4233 0.16 -1.8 4,415,049 - Psest_4233 0.16 -1.3 4,415,225 + Psest_4233 0.31 -1.4 4,415,225 + Psest_4233 0.31 +0.6 4,415,599 + Psest_4233 0.64 -0.1 4,415,599 + Psest_4233 0.64 -0.5 4,415,599 + Psest_4233 0.64 +0.7 4,415,599 + Psest_4233 0.64 +0.5 4,415,599 + Psest_4233 0.64 +1.3 4,415,600 - Psest_4233 0.64 -1.6 4,415,600 - Psest_4233 0.64 -0.5 4,415,600 - Psest_4233 0.64 +1.6 4,415,600 - Psest_4233 0.64 -0.1 4,415,616 - Psest_4233 0.66 -1.0 4,416,023 + -0.4 4,416,024 - -0.3 4,416,107 + +0.7 4,416,107 + -1.3 4,416,107 + +0.2 4,416,108 - -0.9 4,416,108 - +0.3 4,416,108 - -0.8 4,416,108 - +0.7 4,416,108 - +0.6 4,416,132 - -1.3 4,416,132 - +1.2 4,416,158 + Psest_4234 0.11 +0.2 4,416,159 - Psest_4234 0.11 -0.9 4,416,228 + Psest_4234 0.17 +1.2 4,416,228 + Psest_4234 0.17 -2.6 4,416,229 - Psest_4234 0.17 -0.6 4,416,503 + Psest_4234 0.40 +0.9 4,416,503 + Psest_4234 0.40 +1.1 4,416,503 + Psest_4234 0.40 +0.3 4,416,504 - Psest_4234 0.40 -0.7 4,416,767 + Psest_4234 0.62 -0.3 4,416,767 + Psest_4234 0.62 +0.3 4,416,767 + Psest_4234 0.62 -0.1 4,416,767 + Psest_4234 0.62 -0.9 4,416,767 + Psest_4234 0.62 -1.6 4,416,768 - Psest_4234 0.62 -0.1 4,416,871 - Psest_4234 0.71 -0.7 4,416,881 + Psest_4234 0.72 +1.3 4,416,882 - Psest_4234 0.72 -0.3
Or see this region's nucleotide sequence