Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2727 and Psest_2728 are separated by 109 nucleotides Psest_2728 and Psest_2729 are separated by 60 nucleotides
Psest_2727: Psest_2727 - Small-conductance mechanosensitive channel, at 2,913,465 to 2,914,607
_2727
Psest_2728: Psest_2728 - Acyl-CoA dehydrogenases, at 2,914,717 to 2,917,183
_2728
Psest_2729: Psest_2729 - Signal transduction histidine kinase, at 2,917,244 to 2,918,845
_2729
Position (kb)
2914
2915
2916
2917
2918 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.182 kb on + strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.183 kb on - strand, within Psest_2727 at 2914.230 kb on + strand, within Psest_2727 at 2914.230 kb on + strand, within Psest_2727 at 2914.230 kb on + strand, within Psest_2727 at 2914.230 kb on + strand, within Psest_2727 at 2914.230 kb on + strand, within Psest_2727 at 2914.231 kb on - strand, within Psest_2727 at 2914.231 kb on - strand, within Psest_2727 at 2914.365 kb on + strand, within Psest_2727 at 2914.365 kb on + strand, within Psest_2727 at 2914.365 kb on + strand, within Psest_2727 at 2914.366 kb on - strand, within Psest_2727 at 2914.386 kb on + strand, within Psest_2727 at 2914.386 kb on + strand, within Psest_2727 at 2914.387 kb on - strand, within Psest_2727 at 2914.387 kb on - strand, within Psest_2727 at 2914.387 kb on - strand, within Psest_2727 at 2914.396 kb on - strand, within Psest_2727 at 2914.513 kb on + strand at 2914.514 kb on - strand at 2914.637 kb on + strand at 2914.701 kb on + strand at 2914.702 kb on - strand at 2914.813 kb on + strand at 2914.813 kb on + strand at 2914.813 kb on + strand at 2914.813 kb on + strand at 2914.813 kb on + strand at 2914.857 kb on - strand at 2914.857 kb on - strand at 2914.901 kb on + strand at 2914.902 kb on - strand at 2914.925 kb on - strand at 2914.925 kb on - strand at 2914.925 kb on - strand at 2915.194 kb on + strand, within Psest_2728 at 2915.194 kb on + strand, within Psest_2728 at 2915.194 kb on + strand, within Psest_2728 at 2915.194 kb on + strand, within Psest_2728 at 2915.195 kb on - strand, within Psest_2728 at 2915.263 kb on + strand, within Psest_2728 at 2915.368 kb on + strand, within Psest_2728 at 2915.368 kb on + strand, within Psest_2728 at 2915.557 kb on + strand, within Psest_2728 at 2915.557 kb on + strand, within Psest_2728 at 2915.558 kb on - strand, within Psest_2728 at 2915.558 kb on - strand, within Psest_2728 at 2915.609 kb on - strand, within Psest_2728 at 2915.609 kb on - strand, within Psest_2728 at 2915.609 kb on - strand, within Psest_2728 at 2915.653 kb on - strand, within Psest_2728 at 2915.893 kb on + strand, within Psest_2728 at 2915.893 kb on + strand, within Psest_2728 at 2915.894 kb on - strand, within Psest_2728 at 2915.894 kb on - strand, within Psest_2728 at 2915.894 kb on - strand, within Psest_2728 at 2915.894 kb on - strand, within Psest_2728 at 2916.102 kb on - strand, within Psest_2728 at 2916.188 kb on + strand, within Psest_2728 at 2916.188 kb on + strand, within Psest_2728 at 2916.188 kb on + strand, within Psest_2728 at 2916.188 kb on + strand, within Psest_2728 at 2916.189 kb on - strand, within Psest_2728 at 2916.189 kb on - strand, within Psest_2728 at 2916.479 kb on + strand, within Psest_2728 at 2916.479 kb on + strand, within Psest_2728 at 2916.480 kb on - strand, within Psest_2728 at 2916.480 kb on - strand, within Psest_2728 at 2916.597 kb on + strand, within Psest_2728 at 2916.598 kb on - strand, within Psest_2728 at 2916.598 kb on - strand, within Psest_2728 at 2916.598 kb on - strand, within Psest_2728 at 2916.598 kb on - strand, within Psest_2728 at 2916.611 kb on + strand, within Psest_2728 at 2916.612 kb on - strand, within Psest_2728 at 2916.612 kb on - strand, within Psest_2728 at 2916.612 kb on - strand, within Psest_2728 at 2916.723 kb on + strand, within Psest_2728 at 2916.723 kb on + strand, within Psest_2728 at 2916.784 kb on - strand, within Psest_2728 at 2916.784 kb on - strand, within Psest_2728 at 2916.822 kb on + strand, within Psest_2728 at 2916.822 kb on + strand, within Psest_2728 at 2916.822 kb on + strand, within Psest_2728 at 2916.822 kb on + strand, within Psest_2728 at 2916.822 kb on + strand, within Psest_2728 at 2916.823 kb on - strand, within Psest_2728 at 2916.823 kb on - strand, within Psest_2728 at 2916.823 kb on - strand, within Psest_2728 at 2916.899 kb on + strand, within Psest_2728 at 2916.900 kb on - strand, within Psest_2728 at 2916.900 kb on - strand, within Psest_2728 at 2916.900 kb on - strand, within Psest_2728 at 2916.900 kb on - strand, within Psest_2728 at 2917.014 kb on + strand at 2917.014 kb on + strand at 2917.015 kb on - strand at 2917.015 kb on - strand at 2917.332 kb on + strand at 2917.333 kb on - strand at 2917.333 kb on - strand at 2917.333 kb on - strand at 2917.570 kb on + strand, within Psest_2729 at 2917.747 kb on - strand, within Psest_2729 at 2917.810 kb on - strand, within Psest_2729 at 2917.810 kb on - strand, within Psest_2729 at 2917.810 kb on - strand, within Psest_2729 at 2917.810 kb on - strand, within Psest_2729 at 2917.955 kb on - strand, within Psest_2729 at 2918.094 kb on + strand, within Psest_2729 at 2918.095 kb on - strand, within Psest_2729 at 2918.095 kb on - strand, within Psest_2729 at 2918.095 kb on - strand, within Psest_2729 at 2918.095 kb on - strand, within Psest_2729 at 2918.095 kb on - strand, within Psest_2729 at 2918.095 kb on - strand, within Psest_2729 at 2918.172 kb on + strand, within Psest_2729 at 2918.172 kb on + strand, within Psest_2729
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 2,914,182 + Psest_2727 0.63 +0.4 2,914,182 + Psest_2727 0.63 +1.1 2,914,182 + Psest_2727 0.63 +0.4 2,914,182 + Psest_2727 0.63 +1.6 2,914,182 + Psest_2727 0.63 +0.0 2,914,182 + Psest_2727 0.63 +0.3 2,914,182 + Psest_2727 0.63 +0.8 2,914,182 + Psest_2727 0.63 +0.9 2,914,183 - Psest_2727 0.63 +0.5 2,914,183 - Psest_2727 0.63 +1.9 2,914,183 - Psest_2727 0.63 +0.2 2,914,183 - Psest_2727 0.63 +0.5 2,914,183 - Psest_2727 0.63 +0.2 2,914,183 - Psest_2727 0.63 -0.6 2,914,183 - Psest_2727 0.63 +1.1 2,914,230 + Psest_2727 0.67 -1.5 2,914,230 + Psest_2727 0.67 -1.2 2,914,230 + Psest_2727 0.67 +0.8 2,914,230 + Psest_2727 0.67 -0.8 2,914,230 + Psest_2727 0.67 +0.6 2,914,231 - Psest_2727 0.67 -1.4 2,914,231 - Psest_2727 0.67 -0.5 2,914,365 + Psest_2727 0.79 -0.6 2,914,365 + Psest_2727 0.79 -0.1 2,914,365 + Psest_2727 0.79 +1.0 2,914,366 - Psest_2727 0.79 +0.2 2,914,386 + Psest_2727 0.81 -1.5 2,914,386 + Psest_2727 0.81 +0.4 2,914,387 - Psest_2727 0.81 -0.4 2,914,387 - Psest_2727 0.81 -0.4 2,914,387 - Psest_2727 0.81 +1.0 2,914,396 - Psest_2727 0.81 -0.5 2,914,513 + +0.2 2,914,514 - +1.7 2,914,637 + +0.2 2,914,701 + -0.2 2,914,702 - -0.6 2,914,813 + +0.1 2,914,813 + -0.6 2,914,813 + -1.1 2,914,813 + +0.7 2,914,813 + +0.6 2,914,857 - -0.7 2,914,857 - -0.1 2,914,901 + -1.0 2,914,902 - +0.4 2,914,925 - -0.1 2,914,925 - -0.4 2,914,925 - +2.6 2,915,194 + Psest_2728 0.19 -1.3 2,915,194 + Psest_2728 0.19 -0.2 2,915,194 + Psest_2728 0.19 -0.7 2,915,194 + Psest_2728 0.19 -0.6 2,915,195 - Psest_2728 0.19 +1.0 2,915,263 + Psest_2728 0.22 -2.6 2,915,368 + Psest_2728 0.26 -3.5 2,915,368 + Psest_2728 0.26 -0.3 2,915,557 + Psest_2728 0.34 +2.5 2,915,557 + Psest_2728 0.34 -0.3 2,915,558 - Psest_2728 0.34 -0.1 2,915,558 - Psest_2728 0.34 -1.6 2,915,609 - Psest_2728 0.36 +0.1 2,915,609 - Psest_2728 0.36 +0.7 2,915,609 - Psest_2728 0.36 +0.4 2,915,653 - Psest_2728 0.38 -2.7 2,915,893 + Psest_2728 0.48 -0.8 2,915,893 + Psest_2728 0.48 -1.6 2,915,894 - Psest_2728 0.48 -0.2 2,915,894 - Psest_2728 0.48 -0.5 2,915,894 - Psest_2728 0.48 +0.1 2,915,894 - Psest_2728 0.48 +0.5 2,916,102 - Psest_2728 0.56 +0.8 2,916,188 + Psest_2728 0.60 -3.6 2,916,188 + Psest_2728 0.60 -0.2 2,916,188 + Psest_2728 0.60 -0.4 2,916,188 + Psest_2728 0.60 +0.0 2,916,189 - Psest_2728 0.60 -0.3 2,916,189 - Psest_2728 0.60 +1.4 2,916,479 + Psest_2728 0.71 -0.3 2,916,479 + Psest_2728 0.71 +0.6 2,916,480 - Psest_2728 0.71 -1.4 2,916,480 - Psest_2728 0.71 -0.2 2,916,597 + Psest_2728 0.76 -1.0 2,916,598 - Psest_2728 0.76 -2.0 2,916,598 - Psest_2728 0.76 +0.8 2,916,598 - Psest_2728 0.76 -0.6 2,916,598 - Psest_2728 0.76 -2.7 2,916,611 + Psest_2728 0.77 -0.6 2,916,612 - Psest_2728 0.77 +0.7 2,916,612 - Psest_2728 0.77 +0.1 2,916,612 - Psest_2728 0.77 -0.2 2,916,723 + Psest_2728 0.81 +0.9 2,916,723 + Psest_2728 0.81 +0.6 2,916,784 - Psest_2728 0.84 +0.8 2,916,784 - Psest_2728 0.84 -0.7 2,916,822 + Psest_2728 0.85 -0.0 2,916,822 + Psest_2728 0.85 -0.2 2,916,822 + Psest_2728 0.85 +0.4 2,916,822 + Psest_2728 0.85 -0.4 2,916,822 + Psest_2728 0.85 -1.1 2,916,823 - Psest_2728 0.85 -1.9 2,916,823 - Psest_2728 0.85 -1.1 2,916,823 - Psest_2728 0.85 +1.4 2,916,899 + Psest_2728 0.88 +0.0 2,916,900 - Psest_2728 0.88 -0.4 2,916,900 - Psest_2728 0.88 +0.5 2,916,900 - Psest_2728 0.88 +0.4 2,916,900 - Psest_2728 0.88 +0.4 2,917,014 + +0.7 2,917,014 + -1.5 2,917,015 - +0.5 2,917,015 - +0.3 2,917,332 + +0.5 2,917,333 - +0.7 2,917,333 - +0.4 2,917,333 - -2.2 2,917,570 + Psest_2729 0.20 +0.5 2,917,747 - Psest_2729 0.31 -0.2 2,917,810 - Psest_2729 0.35 +0.1 2,917,810 - Psest_2729 0.35 +0.1 2,917,810 - Psest_2729 0.35 -0.1 2,917,810 - Psest_2729 0.35 -1.0 2,917,955 - Psest_2729 0.44 -3.0 2,918,094 + Psest_2729 0.53 +1.7 2,918,095 - Psest_2729 0.53 -0.6 2,918,095 - Psest_2729 0.53 -0.6 2,918,095 - Psest_2729 0.53 +0.0 2,918,095 - Psest_2729 0.53 +0.5 2,918,095 - Psest_2729 0.53 +0.2 2,918,095 - Psest_2729 0.53 +0.3 2,918,172 + Psest_2729 0.58 -0.8 2,918,172 + Psest_2729 0.58 +0.5
Or see this region's nucleotide sequence