Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2517 and Psest_2518 overlap by 10 nucleotides Psest_2518 and Psest_2519 are separated by 29 nucleotides Psest_2519 and Psest_2520 are separated by 65 nucleotides
Psest_2517: Psest_2517 - hypothetical protein, at 2,696,197 to 2,696,556
_2517
Psest_2518: Psest_2518 - Predicted membrane protein, at 2,696,547 to 2,697,392
_2518
Psest_2519: Psest_2519 - Predicted redox protein, regulator of disulfide bond formation, at 2,697,422 to 2,697,673
_2519
Psest_2520: Psest_2520 - Predicted SAM-dependent methyltransferase, at 2,697,739 to 2,698,788
_2520
Position (kb)
2697
2698 Strain fitness (log2 ratio)
-2
-1
0
1 at 2696.582 kb on + strand at 2696.582 kb on + strand at 2696.585 kb on + strand at 2696.586 kb on - strand at 2696.586 kb on - strand at 2696.706 kb on + strand, within Psest_2518 at 2696.707 kb on - strand, within Psest_2518 at 2696.707 kb on - strand, within Psest_2518 at 2696.942 kb on - strand, within Psest_2518 at 2696.992 kb on + strand, within Psest_2518 at 2696.993 kb on - strand, within Psest_2518 at 2696.993 kb on - strand, within Psest_2518 at 2697.020 kb on + strand, within Psest_2518 at 2697.020 kb on + strand, within Psest_2518 at 2697.020 kb on + strand, within Psest_2518 at 2697.021 kb on - strand, within Psest_2518 at 2697.021 kb on - strand, within Psest_2518 at 2697.021 kb on - strand, within Psest_2518 at 2697.033 kb on + strand, within Psest_2518 at 2697.033 kb on + strand, within Psest_2518 at 2697.033 kb on + strand, within Psest_2518 at 2697.034 kb on - strand, within Psest_2518 at 2697.034 kb on - strand, within Psest_2518 at 2697.034 kb on - strand, within Psest_2518 at 2697.163 kb on + strand, within Psest_2518 at 2697.166 kb on + strand, within Psest_2518 at 2697.166 kb on + strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.167 kb on - strand, within Psest_2518 at 2697.170 kb on + strand, within Psest_2518 at 2697.170 kb on + strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.171 kb on - strand, within Psest_2518 at 2697.300 kb on + strand, within Psest_2518 at 2697.301 kb on - strand, within Psest_2518 at 2697.301 kb on - strand, within Psest_2518 at 2697.783 kb on - strand at 2697.901 kb on + strand, within Psest_2520 at 2698.566 kb on - strand, within Psest_2520
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,696,582 + +0.8 2,696,582 + -0.5 2,696,585 + -0.1 2,696,586 - +0.3 2,696,586 - +1.3 2,696,706 + Psest_2518 0.19 -0.0 2,696,707 - Psest_2518 0.19 -0.6 2,696,707 - Psest_2518 0.19 -0.3 2,696,942 - Psest_2518 0.47 +0.1 2,696,992 + Psest_2518 0.53 -0.7 2,696,993 - Psest_2518 0.53 +0.0 2,696,993 - Psest_2518 0.53 -0.3 2,697,020 + Psest_2518 0.56 -0.3 2,697,020 + Psest_2518 0.56 -0.5 2,697,020 + Psest_2518 0.56 -0.3 2,697,021 - Psest_2518 0.56 +0.0 2,697,021 - Psest_2518 0.56 +1.1 2,697,021 - Psest_2518 0.56 +0.9 2,697,033 + Psest_2518 0.57 -0.0 2,697,033 + Psest_2518 0.57 -0.1 2,697,033 + Psest_2518 0.57 +0.9 2,697,034 - Psest_2518 0.58 +0.4 2,697,034 - Psest_2518 0.58 +0.2 2,697,034 - Psest_2518 0.58 -0.0 2,697,163 + Psest_2518 0.73 -0.4 2,697,166 + Psest_2518 0.73 +0.7 2,697,166 + Psest_2518 0.73 -2.2 2,697,167 - Psest_2518 0.73 -0.0 2,697,167 - Psest_2518 0.73 -0.4 2,697,167 - Psest_2518 0.73 -1.4 2,697,167 - Psest_2518 0.73 +0.2 2,697,167 - Psest_2518 0.73 -0.1 2,697,167 - Psest_2518 0.73 +0.9 2,697,167 - Psest_2518 0.73 -0.3 2,697,167 - Psest_2518 0.73 +0.4 2,697,167 - Psest_2518 0.73 -0.2 2,697,170 + Psest_2518 0.74 -2.2 2,697,170 + Psest_2518 0.74 -0.2 2,697,171 - Psest_2518 0.74 -0.4 2,697,171 - Psest_2518 0.74 +0.0 2,697,171 - Psest_2518 0.74 -0.4 2,697,171 - Psest_2518 0.74 +0.5 2,697,171 - Psest_2518 0.74 +1.0 2,697,171 - Psest_2518 0.74 -0.3 2,697,171 - Psest_2518 0.74 -0.1 2,697,171 - Psest_2518 0.74 -0.3 2,697,171 - Psest_2518 0.74 +0.5 2,697,300 + Psest_2518 0.89 +0.3 2,697,301 - Psest_2518 0.89 -1.4 2,697,301 - Psest_2518 0.89 +0.4 2,697,783 - +1.6 2,697,901 + Psest_2520 0.15 -0.4 2,698,566 - Psest_2520 0.79 -0.2
Or see this region's nucleotide sequence