Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2373 and Psest_2374 overlap by 1 nucleotides Psest_2374 and Psest_2375 overlap by 1 nucleotides Psest_2375 and Psest_2376 overlap by 4 nucleotides Psest_2376 and Psest_2377 overlap by 4 nucleotides
Psest_2373: Psest_2373 - sulfur relay protein TusD/DsrE, at 2,525,516 to 2,525,908
_2373
Psest_2374: Psest_2374 - sulfur relay protein TusC/DsrF, at 2,525,908 to 2,526,267
_2374
Psest_2375: Psest_2375 - sulfur relay protein TusB/DsrH, at 2,526,267 to 2,526,569
_2375
Psest_2376: Psest_2376 - sulfur relay protein, TusE/DsrC/DsvC family, at 2,526,566 to 2,526,898
_2376
Psest_2377: Psest_2377 - Anthranilate phosphoribosyltransferase, at 2,526,895 to 2,527,878
_2377
Position (kb)
2526
2527 Strain fitness (log2 ratio)
-1
0
1
2 at 2527.009 kb on - strand, within Psest_2377 at 2527.169 kb on - strand, within Psest_2377 at 2527.199 kb on - strand, within Psest_2377 at 2527.199 kb on - strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.282 kb on + strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.283 kb on - strand, within Psest_2377 at 2527.876 kb on + strand at 2527.876 kb on + strand at 2527.877 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,527,009 - Psest_2377 0.12 +0.6 2,527,169 - Psest_2377 0.28 -0.4 2,527,199 - Psest_2377 0.31 +2.0 2,527,199 - Psest_2377 0.31 +0.9 2,527,282 + Psest_2377 0.39 +0.3 2,527,282 + Psest_2377 0.39 -0.1 2,527,282 + Psest_2377 0.39 -0.2 2,527,282 + Psest_2377 0.39 +0.5 2,527,282 + Psest_2377 0.39 +0.7 2,527,282 + Psest_2377 0.39 -0.4 2,527,282 + Psest_2377 0.39 -0.4 2,527,283 - Psest_2377 0.39 -0.2 2,527,283 - Psest_2377 0.39 -0.7 2,527,283 - Psest_2377 0.39 +1.6 2,527,283 - Psest_2377 0.39 -1.1 2,527,283 - Psest_2377 0.39 +1.4 2,527,283 - Psest_2377 0.39 +0.0 2,527,283 - Psest_2377 0.39 -0.6 2,527,283 - Psest_2377 0.39 -1.3 2,527,283 - Psest_2377 0.39 -0.4 2,527,283 - Psest_2377 0.39 -0.4 2,527,876 + -0.0 2,527,876 + +1.0 2,527,877 - -0.8
Or see this region's nucleotide sequence