Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2130 and Psest_2131 are separated by 202 nucleotides Psest_2131 and Psest_2132 are separated by 63 nucleotides Psest_2132 and Psest_2133 are separated by 8 nucleotides
Psest_2130: Psest_2130 - exodeoxyribonuclease III, at 2,262,519 to 2,263,331
_2130
Psest_2131: Psest_2131 - Acetyltransferases, at 2,263,534 to 2,264,169
_2131
Psest_2132: Psest_2132 - Outer membrane protein, at 2,264,233 to 2,266,047
_2132
Psest_2133: Psest_2133 - Uncharacterized protein conserved in bacteria, at 2,266,056 to 2,269,724
_2133
Position (kb)
2264
2265
2266
2267 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2263.350 kb on + strand at 2263.445 kb on - strand at 2263.445 kb on - strand at 2263.445 kb on - strand at 2263.455 kb on - strand at 2263.492 kb on + strand at 2263.493 kb on - strand at 2263.601 kb on - strand, within Psest_2131 at 2263.601 kb on - strand, within Psest_2131 at 2263.633 kb on + strand, within Psest_2131 at 2263.713 kb on - strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.937 kb on + strand, within Psest_2131 at 2263.938 kb on - strand, within Psest_2131 at 2263.938 kb on - strand, within Psest_2131 at 2264.065 kb on + strand, within Psest_2131 at 2264.168 kb on - strand at 2264.260 kb on - strand at 2264.270 kb on + strand at 2264.306 kb on + strand at 2264.307 kb on - strand at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.452 kb on + strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.453 kb on - strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.456 kb on + strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2264.457 kb on - strand, within Psest_2132 at 2265.023 kb on - strand, within Psest_2132 at 2265.188 kb on + strand, within Psest_2132 at 2265.189 kb on - strand, within Psest_2132 at 2265.208 kb on + strand, within Psest_2132 at 2265.208 kb on + strand, within Psest_2132 at 2265.208 kb on + strand, within Psest_2132 at 2265.209 kb on - strand, within Psest_2132 at 2265.209 kb on - strand, within Psest_2132 at 2265.259 kb on + strand, within Psest_2132 at 2265.260 kb on - strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.439 kb on + strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.440 kb on - strand, within Psest_2132 at 2265.468 kb on + strand, within Psest_2132 at 2265.468 kb on + strand, within Psest_2132 at 2265.469 kb on - strand, within Psest_2132 at 2265.469 kb on - strand, within Psest_2132 at 2265.469 kb on - strand, within Psest_2132 at 2265.493 kb on + strand, within Psest_2132 at 2265.493 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.499 kb on + strand, within Psest_2132 at 2265.500 kb on - strand, within Psest_2132 at 2265.628 kb on - strand, within Psest_2132 at 2265.694 kb on + strand, within Psest_2132 at 2265.694 kb on + strand, within Psest_2132 at 2265.722 kb on - strand, within Psest_2132 at 2265.722 kb on - strand, within Psest_2132 at 2265.722 kb on - strand, within Psest_2132 at 2265.835 kb on + strand, within Psest_2132 at 2265.841 kb on + strand, within Psest_2132 at 2265.841 kb on + strand, within Psest_2132 at 2266.127 kb on + strand at 2266.128 kb on - strand at 2266.162 kb on + strand at 2266.426 kb on + strand, within Psest_2133 at 2266.426 kb on + strand, within Psest_2133 at 2266.427 kb on - strand, within Psest_2133 at 2266.520 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.522 kb on + strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.523 kb on - strand, within Psest_2133 at 2266.717 kb on - strand, within Psest_2133 at 2266.953 kb on - strand, within Psest_2133 at 2267.008 kb on + strand, within Psest_2133 at 2267.009 kb on - strand, within Psest_2133
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,263,350 + +0.3 2,263,445 - -0.5 2,263,445 - -0.9 2,263,445 - -0.0 2,263,455 - +0.5 2,263,492 + -0.0 2,263,493 - -1.1 2,263,601 - Psest_2131 0.11 -0.5 2,263,601 - Psest_2131 0.11 +1.9 2,263,633 + Psest_2131 0.16 +0.7 2,263,713 - Psest_2131 0.28 +0.1 2,263,937 + Psest_2131 0.63 -0.8 2,263,937 + Psest_2131 0.63 -0.2 2,263,937 + Psest_2131 0.63 -1.3 2,263,937 + Psest_2131 0.63 +0.1 2,263,938 - Psest_2131 0.64 -3.3 2,263,938 - Psest_2131 0.64 -1.8 2,264,065 + Psest_2131 0.83 +0.3 2,264,168 - +1.5 2,264,260 - -0.2 2,264,270 + -0.1 2,264,306 + +0.9 2,264,307 - -1.1 2,264,452 + Psest_2132 0.12 +1.4 2,264,452 + Psest_2132 0.12 -1.1 2,264,452 + Psest_2132 0.12 -1.5 2,264,452 + Psest_2132 0.12 -2.0 2,264,452 + Psest_2132 0.12 -3.1 2,264,452 + Psest_2132 0.12 +0.5 2,264,452 + Psest_2132 0.12 -1.1 2,264,452 + Psest_2132 0.12 -1.5 2,264,453 - Psest_2132 0.12 -0.4 2,264,453 - Psest_2132 0.12 -1.2 2,264,453 - Psest_2132 0.12 -0.3 2,264,453 - Psest_2132 0.12 -1.5 2,264,453 - Psest_2132 0.12 -1.2 2,264,453 - Psest_2132 0.12 -1.0 2,264,453 - Psest_2132 0.12 -1.7 2,264,453 - Psest_2132 0.12 -0.0 2,264,453 - Psest_2132 0.12 -1.3 2,264,453 - Psest_2132 0.12 -1.2 2,264,456 + Psest_2132 0.12 -2.0 2,264,456 + Psest_2132 0.12 -0.5 2,264,456 + Psest_2132 0.12 -2.0 2,264,456 + Psest_2132 0.12 -1.5 2,264,456 + Psest_2132 0.12 -0.2 2,264,456 + Psest_2132 0.12 -1.4 2,264,456 + Psest_2132 0.12 -1.3 2,264,456 + Psest_2132 0.12 -0.6 2,264,456 + Psest_2132 0.12 +0.1 2,264,456 + Psest_2132 0.12 -1.1 2,264,456 + Psest_2132 0.12 -1.7 2,264,456 + Psest_2132 0.12 -3.0 2,264,457 - Psest_2132 0.12 -0.2 2,264,457 - Psest_2132 0.12 +0.1 2,264,457 - Psest_2132 0.12 -0.2 2,264,457 - Psest_2132 0.12 -0.6 2,264,457 - Psest_2132 0.12 -0.5 2,264,457 - Psest_2132 0.12 +0.6 2,264,457 - Psest_2132 0.12 -1.3 2,264,457 - Psest_2132 0.12 -0.5 2,264,457 - Psest_2132 0.12 -0.8 2,265,023 - Psest_2132 0.44 -0.8 2,265,188 + Psest_2132 0.53 -0.1 2,265,189 - Psest_2132 0.53 -1.3 2,265,208 + Psest_2132 0.54 +0.1 2,265,208 + Psest_2132 0.54 -1.3 2,265,208 + Psest_2132 0.54 -2.0 2,265,209 - Psest_2132 0.54 -1.2 2,265,209 - Psest_2132 0.54 -0.4 2,265,259 + Psest_2132 0.57 -0.6 2,265,260 - Psest_2132 0.57 -0.5 2,265,439 + Psest_2132 0.66 +0.8 2,265,439 + Psest_2132 0.66 -1.4 2,265,439 + Psest_2132 0.66 -0.6 2,265,439 + Psest_2132 0.66 -2.4 2,265,440 - Psest_2132 0.67 +0.8 2,265,440 - Psest_2132 0.67 +0.4 2,265,440 - Psest_2132 0.67 -0.7 2,265,440 - Psest_2132 0.67 -1.8 2,265,440 - Psest_2132 0.67 -1.7 2,265,440 - Psest_2132 0.67 -0.5 2,265,468 + Psest_2132 0.68 -0.5 2,265,468 + Psest_2132 0.68 -0.2 2,265,469 - Psest_2132 0.68 -0.0 2,265,469 - Psest_2132 0.68 -0.7 2,265,469 - Psest_2132 0.68 +0.5 2,265,493 + Psest_2132 0.69 -0.7 2,265,493 + Psest_2132 0.69 -1.0 2,265,499 + Psest_2132 0.70 -0.7 2,265,499 + Psest_2132 0.70 -1.5 2,265,499 + Psest_2132 0.70 -0.9 2,265,499 + Psest_2132 0.70 -1.3 2,265,500 - Psest_2132 0.70 -3.0 2,265,628 - Psest_2132 0.77 -0.4 2,265,694 + Psest_2132 0.80 -0.0 2,265,694 + Psest_2132 0.80 +0.1 2,265,722 - Psest_2132 0.82 -0.5 2,265,722 - Psest_2132 0.82 -1.8 2,265,722 - Psest_2132 0.82 -0.6 2,265,835 + Psest_2132 0.88 -0.1 2,265,841 + Psest_2132 0.89 -0.0 2,265,841 + Psest_2132 0.89 -0.4 2,266,127 + -0.1 2,266,128 - -2.0 2,266,162 + -0.6 2,266,426 + Psest_2133 0.10 -1.2 2,266,426 + Psest_2133 0.10 -1.6 2,266,427 - Psest_2133 0.10 +0.0 2,266,520 + Psest_2133 0.13 -0.6 2,266,522 + Psest_2133 0.13 +1.1 2,266,522 + Psest_2133 0.13 -3.6 2,266,522 + Psest_2133 0.13 -0.5 2,266,522 + Psest_2133 0.13 +0.3 2,266,522 + Psest_2133 0.13 -0.7 2,266,522 + Psest_2133 0.13 +0.0 2,266,522 + Psest_2133 0.13 -0.5 2,266,522 + Psest_2133 0.13 -0.5 2,266,522 + Psest_2133 0.13 -2.5 2,266,522 + Psest_2133 0.13 -0.7 2,266,522 + Psest_2133 0.13 -0.5 2,266,522 + Psest_2133 0.13 -0.9 2,266,523 - Psest_2133 0.13 +1.0 2,266,523 - Psest_2133 0.13 -0.5 2,266,523 - Psest_2133 0.13 -0.7 2,266,523 - Psest_2133 0.13 +0.5 2,266,523 - Psest_2133 0.13 -1.0 2,266,717 - Psest_2133 0.18 +0.3 2,266,953 - Psest_2133 0.24 -0.9 2,267,008 + Psest_2133 0.26 +1.4 2,267,009 - Psest_2133 0.26 -0.9
Or see this region's nucleotide sequence