Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1793 and Psest_1794 are separated by 14 nucleotides Psest_1794 and Psest_1795 are separated by 2 nucleotides Psest_1795 and Psest_1796 are separated by 112 nucleotides
Psest_1793: Psest_1793 - Predicted divalent heavy-metal cations transporter, at 1,888,575 to 1,889,507
_1793
Psest_1794: Psest_1794 - Flagellar motor protein, at 1,889,522 to 1,890,262
_1794
Psest_1795: Psest_1795 - Flagellar motor component, at 1,890,265 to 1,891,074
_1795
Psest_1796: Psest_1796 - Predicted NAD/FAD-dependent oxidoreductase, at 1,891,187 to 1,892,173
_1796
Position (kb)
1889
1890
1891 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1888.542 kb on - strand at 1888.707 kb on - strand, within Psest_1793 at 1889.011 kb on - strand, within Psest_1793 at 1889.566 kb on + strand at 1889.566 kb on + strand at 1889.670 kb on + strand, within Psest_1794 at 1889.876 kb on - strand, within Psest_1794 at 1889.887 kb on + strand, within Psest_1794 at 1889.887 kb on + strand, within Psest_1794 at 1890.029 kb on - strand, within Psest_1794 at 1890.171 kb on + strand, within Psest_1794 at 1890.171 kb on + strand, within Psest_1794 at 1890.172 kb on - strand, within Psest_1794 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.362 kb on + strand, within Psest_1795 at 1890.363 kb on - strand, within Psest_1795 at 1890.363 kb on - strand, within Psest_1795 at 1890.363 kb on - strand, within Psest_1795 at 1890.406 kb on + strand, within Psest_1795 at 1890.620 kb on + strand, within Psest_1795 at 1890.621 kb on - strand, within Psest_1795 at 1890.621 kb on - strand, within Psest_1795 at 1890.621 kb on - strand, within Psest_1795 at 1890.825 kb on + strand, within Psest_1795 at 1890.825 kb on + strand, within Psest_1795 at 1890.825 kb on + strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.826 kb on - strand, within Psest_1795 at 1890.857 kb on + strand, within Psest_1795 at 1890.857 kb on + strand, within Psest_1795 at 1890.857 kb on + strand, within Psest_1795 at 1890.858 kb on - strand, within Psest_1795 at 1890.858 kb on - strand, within Psest_1795
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,888,542 - -1.6 1,888,707 - Psest_1793 0.14 +1.0 1,889,011 - Psest_1793 0.47 +0.7 1,889,566 + +0.0 1,889,566 + -1.6 1,889,670 + Psest_1794 0.20 +1.3 1,889,876 - Psest_1794 0.48 +1.2 1,889,887 + Psest_1794 0.49 +1.2 1,889,887 + Psest_1794 0.49 -0.2 1,890,029 - Psest_1794 0.68 -0.3 1,890,171 + Psest_1794 0.88 -0.1 1,890,171 + Psest_1794 0.88 +0.5 1,890,172 - Psest_1794 0.88 +1.1 1,890,362 + Psest_1795 0.12 +0.1 1,890,362 + Psest_1795 0.12 +0.3 1,890,362 + Psest_1795 0.12 -1.8 1,890,362 + Psest_1795 0.12 +0.4 1,890,362 + Psest_1795 0.12 +0.3 1,890,363 - Psest_1795 0.12 -1.1 1,890,363 - Psest_1795 0.12 +0.0 1,890,363 - Psest_1795 0.12 -1.2 1,890,406 + Psest_1795 0.17 -2.3 1,890,620 + Psest_1795 0.44 -0.1 1,890,621 - Psest_1795 0.44 +2.1 1,890,621 - Psest_1795 0.44 +0.6 1,890,621 - Psest_1795 0.44 +0.1 1,890,825 + Psest_1795 0.69 +0.3 1,890,825 + Psest_1795 0.69 +0.5 1,890,825 + Psest_1795 0.69 +0.6 1,890,826 - Psest_1795 0.69 +0.2 1,890,826 - Psest_1795 0.69 +0.0 1,890,826 - Psest_1795 0.69 -1.0 1,890,826 - Psest_1795 0.69 +0.4 1,890,826 - Psest_1795 0.69 -0.5 1,890,826 - Psest_1795 0.69 +0.6 1,890,826 - Psest_1795 0.69 +0.2 1,890,826 - Psest_1795 0.69 +0.3 1,890,857 + Psest_1795 0.73 +0.1 1,890,857 + Psest_1795 0.73 +0.2 1,890,857 + Psest_1795 0.73 -0.1 1,890,858 - Psest_1795 0.73 -1.4 1,890,858 - Psest_1795 0.73 -0.3
Or see this region's nucleotide sequence