Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0008

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
9,083	+		Psest_0007	0.32	+1.0
9,083	+		Psest_0007	0.32	+0.7
9,247	+		Psest_0007	0.44	-1.3
9,281	+		Psest_0007	0.47	-0.6
9,281	+		Psest_0007	0.47	+0.1
9,281	+		Psest_0007	0.47	+1.3
9,281	+		Psest_0007	0.47	+1.3
9,282	-		Psest_0007	0.47	-1.2
9,282	-		Psest_0007	0.47	-0.5
9,282	-		Psest_0007	0.47	-1.2
9,282	-		Psest_0007	0.47	-1.8
9,285	+		Psest_0007	0.47	+2.2
9,285	+		Psest_0007	0.47	+0.2
9,285	+		Psest_0007	0.47	-0.2
9,285	+		Psest_0007	0.47	-0.4
9,285	+		Psest_0007	0.47	-1.7
9,285	+		Psest_0007	0.47	-0.1
9,285	+		Psest_0007	0.47	-0.5
9,286	-		Psest_0007	0.47	+1.3
9,286	-		Psest_0007	0.47	+1.0
9,286	-		Psest_0007	0.47	+0.3
9,544	-		Psest_0007	0.66	-1.0
9,883	-				+2.3
9,883	-				+0.9
10,001	+				-0.5
10,002	-				+0.1
10,002	-				-1.5
10,002	-				-3.1
10,002	-				-0.5
10,002	-				-3.0
10,013	-				-1.0
10,828	-				+0.1
10,828	-				-2.1
10,828	-				-0.9
11,358	-				+2.0