Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4341

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
4,539,875	+		Psest_4339	0.63	-1.0
4,539,875	+		Psest_4339	0.63	-0.7
4,539,936	+		Psest_4339	0.75	+1.9
4,539,936	+		Psest_4339	0.75	+1.1
4,539,937	-		Psest_4339	0.75	-0.1
4,539,937	-		Psest_4339	0.75	+1.8
4,540,020	-				+2.2
4,540,020	-				+1.0
4,540,050	+				+2.0
4,540,050	+				+1.1
4,540,050	+				+0.1
4,540,050	+				+0.0
4,540,051	-				+0.6
4,540,051	-				-0.4
4,540,453	-		Psest_4340	0.42	-2.1
4,540,572	+		Psest_4340	0.64	+2.6
4,540,627	+		Psest_4340	0.75	-1.6
4,540,627	+		Psest_4340	0.75	+3.4
4,540,651	+		Psest_4340	0.79	+0.3
4,540,657	-		Psest_4340	0.80	-0.0
4,540,657	-		Psest_4340	0.80	-0.8
4,540,814	-				-0.1
4,540,888	+				+0.6
4,540,888	+		Psest_4341	0.21	-1.2
4,540,888	+		Psest_4341	0.21	+0.7
4,540,888	+		Psest_4341	0.21	-0.7
4,540,891	+		Psest_4341	0.22	-1.7
4,540,891	+		Psest_4341	0.22	-1.4
4,540,892	-		Psest_4341	0.22	-1.6
4,540,892	-		Psest_4341	0.22	+0.3
4,540,892	-		Psest_4341	0.22	-1.0
4,540,892	-		Psest_4341	0.22	-0.9
4,541,136	+		Psest_4341	0.89	-1.8
4,541,137	-		Psest_4341	0.90	+1.3
4,541,137	-		Psest_4341	0.90	-0.2
4,541,179	+				-1.3
4,541,180	-				+1.5
4,541,180	-				-1.7
4,541,180	-				+1.6
4,541,276	-				-0.7
4,541,374	-		Psest_4342	0.13	+0.1
4,541,440	+		Psest_4342	0.20	+0.6
4,541,441	-		Psest_4342	0.20	-1.0
4,541,731	+		Psest_4342	0.49	+1.1
4,541,731	+		Psest_4342	0.49	+0.7
4,541,731	+		Psest_4342	0.49	+0.5
4,541,731	+		Psest_4342	0.49	+0.6
4,541,731	+		Psest_4342	0.49	+0.4
4,541,732	-		Psest_4342	0.49	-0.8
4,541,732	-		Psest_4342	0.49	+0.5
4,541,732	-		Psest_4342	0.49	-0.7
4,541,732	-		Psest_4342	0.49	-1.2
4,541,914	-		Psest_4342	0.68	-1.4