Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0424

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
460,128	+		Psest_0423	0.52	-1.5
460,131	+		Psest_0423	0.52	-1.1
460,132	-		Psest_0423	0.52	+0.1
460,149	-		Psest_0423	0.53	+1.9
460,189	+		Psest_0423	0.55	-0.8
460,320	-		Psest_0423	0.62	-1.6
460,349	+		Psest_0423	0.63	+1.7
460,419	-		Psest_0423	0.66	-1.2
460,539	+		Psest_0423	0.72	-0.7
460,540	-		Psest_0423	0.72	+3.1
460,543	+		Psest_0423	0.72	-1.2
460,543	+		Psest_0423	0.72	-1.6
460,543	+		Psest_0423	0.72	-1.1
460,563	+		Psest_0423	0.73	-1.0
460,563	+		Psest_0423	0.73	-0.5
460,564	-		Psest_0423	0.73	-0.7
460,740	-		Psest_0423	0.82	-0.1
460,822	+		Psest_0423	0.86	+0.6
460,822	+		Psest_0423	0.86	-0.2
460,822	+		Psest_0423	0.86	+0.6
460,822	+		Psest_0423	0.86	+3.1
460,823	-		Psest_0423	0.86	+2.9
460,823	-		Psest_0423	0.86	-2.6
460,823	-		Psest_0423	0.86	-0.5
460,823	-		Psest_0423	0.86	+2.2
460,832	+		Psest_0423	0.86	-1.2
460,871	-		Psest_0423	0.88	-0.6
460,941	-				+0.6
460,998	+				-0.6
461,448	+		Psest_0424	0.18	-1.2
461,598	+		Psest_0424	0.26	+2.2
461,613	+		Psest_0424	0.27	+0.2
461,664	+		Psest_0424	0.30	+2.4
461,679	+		Psest_0424	0.31	+0.7
461,744	+		Psest_0424	0.34	-2.1
461,823	-		Psest_0424	0.38	-2.4
461,869	+		Psest_0424	0.41	-1.8
461,870	-		Psest_0424	0.41	+0.9
461,919	+		Psest_0424	0.44	-0.6
461,963	-		Psest_0424	0.46	+1.1
461,987	+		Psest_0424	0.47	-0.9
462,075	+		Psest_0424	0.52	-1.2
462,075	+		Psest_0424	0.52	-0.5
462,261	+		Psest_0424	0.62	-0.5
462,262	-		Psest_0424	0.62	-1.1
462,432	+		Psest_0424	0.71	-0.8
462,600	+		Psest_0424	0.80	+1.2
462,636	+		Psest_0424	0.82	-1.7
462,636	+		Psest_0424	0.82	-1.3
462,648	+		Psest_0424	0.82	-2.0
462,648	+		Psest_0424	0.82	-2.2
462,669	+		Psest_0424	0.84	-0.8
462,692	+		Psest_0424	0.85	-2.7
462,692	+		Psest_0424	0.85	+0.7
462,735	+		Psest_0424	0.87	-0.8
462,825	+				-1.3
462,850	-				-0.3
463,103	+				-0.9
463,103	+				+0.7
463,195	+				+0.9
463,340	+				-0.6
463,340	+				-3.0
463,361	+				-1.0
463,361	+				+0.7
463,363	+				+0.4
463,453	+				-2.1
463,497	+				+0.0
463,570	+				+1.3
463,570	+				-0.1
463,570	+				+0.1
463,746	+				-0.7
463,796	+				+1.2
463,797	-				-0.1
463,836	+				-1.7
463,852	+				-0.1
463,852	+				+0.7
463,853	-				+1.6
463,867	-				+2.6
463,867	-				+1.0
463,867	-				+0.4
463,867	-				+0.5
463,867	-				+0.3
463,867	-				+2.2
463,867	-				-0.4
463,867	-				+1.9
463,867	-				-1.2
463,867	-				-1.7
463,867	-				+0.4
463,871	-				+2.1
463,871	-				+2.2
463,871	-				+0.7
463,941	+				+2.8