Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4246

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
4,427,767	+		Psest_4245	0.15	+1.0
4,427,767	+		Psest_4245	0.15	+1.8
4,427,768	-		Psest_4245	0.15	+0.2
4,427,768	-		Psest_4245	0.15	+2.2
4,427,768	-		Psest_4245	0.15	+0.1
4,427,768	-		Psest_4245	0.15	+2.3
4,427,822	+		Psest_4245	0.22	+1.1
4,427,987	-		Psest_4245	0.40	+1.5
4,428,172	+		Psest_4245	0.61	+0.7
4,428,172	+		Psest_4245	0.61	+3.1
4,428,172	+		Psest_4245	0.61	-0.8
4,428,172	+		Psest_4245	0.61	-1.7
4,428,172	+		Psest_4245	0.61	-3.4
4,428,172	+		Psest_4245	0.61	-2.6
4,428,172	+		Psest_4245	0.61	+1.7
4,428,172	+		Psest_4245	0.61	+1.1
4,428,173	-		Psest_4245	0.61	-0.1
4,428,173	-		Psest_4245	0.61	-2.9
4,428,173	-		Psest_4245	0.61	-1.7
4,428,173	-		Psest_4245	0.61	-2.3
4,428,173	-		Psest_4245	0.61	+3.8
4,428,173	-		Psest_4245	0.61	+1.6
4,428,173	-		Psest_4245	0.61	-1.6
4,428,173	-		Psest_4245	0.61	+1.2
4,428,173	-		Psest_4245	0.61	+3.5
4,428,205	+		Psest_4245	0.65	+0.3
4,428,206	-		Psest_4245	0.65	-1.3
4,428,407	-		Psest_4245	0.88	+2.9
4,428,461	-				+2.6
4,428,461	-				-1.0
4,428,915	-		Psest_4246	0.11	-1.1
4,428,915	-		Psest_4246	0.11	+1.3
4,428,915	-		Psest_4246	0.11	-0.5
4,428,915	-		Psest_4246	0.11	-0.0
4,429,046	+		Psest_4246	0.15	-0.8
4,429,046	+		Psest_4246	0.15	-1.2
4,429,047	-		Psest_4246	0.15	+1.6
4,429,047	-		Psest_4246	0.15	+3.5
4,429,047	-		Psest_4246	0.15	+0.0
4,429,047	-		Psest_4246	0.15	+1.9
4,429,088	+		Psest_4246	0.16	+0.5
4,429,088	+		Psest_4246	0.16	-0.8
4,429,088	+		Psest_4246	0.16	-0.6
4,429,088	+		Psest_4246	0.16	-0.3
4,429,308	-		Psest_4246	0.22	+1.2
4,429,308	-		Psest_4246	0.22	+1.9
4,429,311	+		Psest_4246	0.22	-1.0
4,429,311	+		Psest_4246	0.22	+0.0
4,429,311	+		Psest_4246	0.22	-0.1
4,429,312	-		Psest_4246	0.23	+0.1
4,429,312	-		Psest_4246	0.23	-0.5
4,429,312	-		Psest_4246	0.23	-1.1
4,429,312	-		Psest_4246	0.23	-0.4
4,429,644	-		Psest_4246	0.32	+0.1
4,429,644	-		Psest_4246	0.32	+0.0
4,429,763	-		Psest_4246	0.35	+1.0
4,429,763	-		Psest_4246	0.35	-1.0
4,429,862	+		Psest_4246	0.38	-1.3
4,429,862	+		Psest_4246	0.38	+0.0
4,429,863	-		Psest_4246	0.38	-1.6
4,430,039	+		Psest_4246	0.43	-2.6
4,430,039	+		Psest_4246	0.43	-1.4
4,430,040	-		Psest_4246	0.43	+1.0
4,430,103	-		Psest_4246	0.45	+0.1
4,430,478	-		Psest_4246	0.55	+0.4
4,430,527	+		Psest_4246	0.57	+0.5
4,430,571	-		Psest_4246	0.58	+0.3
4,430,572	+		Psest_4246	0.58	-1.2
4,430,572	+		Psest_4246	0.58	+1.7
4,430,572	+		Psest_4246	0.58	-0.9
4,430,572	+		Psest_4246	0.58	-3.5
4,430,573	-		Psest_4246	0.58	+0.8
4,430,573	-		Psest_4246	0.58	-0.8
4,430,573	-		Psest_4246	0.58	+0.3
4,430,573	-		Psest_4246	0.58	+1.0
4,430,573	-		Psest_4246	0.58	-1.7
4,430,588	+		Psest_4246	0.59	-1.0
4,430,588	+		Psest_4246	0.59	-0.7
4,430,588	+		Psest_4246	0.59	-1.4
4,430,588	+		Psest_4246	0.59	+1.7
4,430,589	-		Psest_4246	0.59	+1.4
4,430,589	-		Psest_4246	0.59	-1.8
4,430,667	+		Psest_4246	0.61	+1.7
4,430,735	+		Psest_4246	0.63	+0.9
4,430,735	+		Psest_4246	0.63	-0.2
4,430,735	+		Psest_4246	0.63	-1.1
4,430,735	+		Psest_4246	0.63	-1.6
4,430,736	-		Psest_4246	0.63	-0.1
4,430,736	-		Psest_4246	0.63	+0.1
4,430,736	-		Psest_4246	0.63	+2.6
4,430,736	-		Psest_4246	0.63	+0.8
4,430,736	-		Psest_4246	0.63	+1.5
4,430,736	-		Psest_4246	0.63	-0.1
4,430,747	+		Psest_4246	0.63	-0.6
4,430,748	-		Psest_4246	0.63	+0.9
4,430,801	-		Psest_4246	0.65	+2.4
4,430,801	-		Psest_4246	0.65	-1.0
4,431,348	-		Psest_4246	0.80	+2.1
4,431,348	-		Psest_4246	0.80	+0.8
4,431,383	+		Psest_4246	0.81	-1.7
4,431,384	-		Psest_4246	0.81	-2.0
4,431,690	-		Psest_4246	0.90	-0.0
4,431,749	+				-0.7
4,431,974	+				-0.2
4,431,975	-				+0.5
4,431,975	-				-1.0
4,431,975	-				+0.4
4,431,975	-				+0.2
4,431,975	-				-0.5
4,431,975	-				+2.0
4,431,975	-				+0.3
4,432,239	-		Psest_4247	0.25	-0.7
4,432,429	+		Psest_4247	0.51	+1.2
4,432,430	-		Psest_4247	0.51	+0.6
4,432,430	-		Psest_4247	0.51	-1.1
4,432,453	+		Psest_4247	0.55	+1.3
4,432,649	-		Psest_4247	0.81	+1.5
4,432,649	-		Psest_4247	0.81	+2.2
4,432,812	+				+1.0
4,432,812	+				+1.2
4,432,812	+				-0.9
4,432,812	+				+0.2
4,432,813	-				-1.0
4,432,813	-				+1.0
4,432,888	+		Psest_4248	0.11	+1.0
4,432,995	+		Psest_4248	0.22	+0.3
4,432,995	+		Psest_4248	0.22	+0.0
4,432,996	-		Psest_4248	0.22	+1.4
4,432,996	-		Psest_4248	0.22	+1.0
4,432,996	-		Psest_4248	0.22	-2.2
4,432,996	-		Psest_4248	0.22	+0.7