Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3777

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,943,842	+		Psest_3776	0.55	+1.3
3,943,842	+		Psest_3776	0.55	-1.8
3,944,131	-		Psest_3776	0.70	-2.3
3,944,432	+		Psest_3776	0.85	-3.7
3,944,433	-		Psest_3776	0.85	-0.6
3,944,433	-		Psest_3776	0.85	-0.1
3,944,433	-		Psest_3776	0.85	-2.6
3,944,433	-		Psest_3776	0.85	-0.7
3,944,433	-		Psest_3776	0.85	+0.1
3,944,510	+		Psest_3776	0.89	-0.8
3,944,510	+		Psest_3776	0.89	-0.8
3,944,511	-		Psest_3776	0.89	-0.3
3,944,511	-		Psest_3776	0.89	-0.2
3,944,511	-		Psest_3776	0.89	-0.9
3,944,588	+				-0.3
3,944,588	+				-2.1
3,944,588	+				+0.3
3,944,589	-				-0.6
3,944,589	-				+1.6
3,944,589	-				-3.3
3,944,589	-				-3.2
3,944,589	-				+0.5
3,944,589	-				+0.7
3,944,589	-				+1.6
3,944,630	+				+0.5
3,944,630	+				-0.3
3,944,631	-				+1.2
3,945,130	+		Psest_3777	0.22	-0.1
3,945,131	-		Psest_3777	0.22	-0.2
3,945,386	-		Psest_3777	0.38	+0.1
3,945,386	-		Psest_3777	0.38	-1.5
3,945,488	+		Psest_3777	0.44	-1.6
3,945,729	-		Psest_3777	0.58	-2.1
3,945,729	-		Psest_3777	0.58	-2.5
3,945,953	+		Psest_3777	0.72	-1.3
3,946,384	+				-0.3
3,946,385	-				-0.8
3,946,385	-				-2.4
3,946,385	-				+0.5
3,946,385	-				-0.5
3,946,446	-				-0.9
3,946,446	-				-0.8
3,946,446	-				-0.9
3,946,446	-				-1.1
3,946,519	-				-0.6
3,946,519	-				-1.5
3,946,526	+				-1.8
3,946,527	-				-0.6
3,946,527	-				+0.0
3,946,527	-				-1.2
3,946,567	+				+1.4
3,946,568	-				-0.5
3,946,608	+				+1.1