Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3774

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,940,004	+				-1.8
3,940,005	-				-1.2
3,940,005	-				+0.0
3,940,026	-				+0.9
3,940,057	+				+0.6
3,940,058	-				-0.3
3,940,091	+				+0.2
3,940,091	+				-2.2
3,940,092	-				-0.7
3,940,092	-				+0.6
3,940,092	-				+2.7
3,940,092	-				-0.6
3,940,092	-				-2.3
3,940,092	-				+0.6
3,940,791	+				-1.1
3,940,791	+				+2.2
3,940,791	+				-0.1
3,940,791	+				+0.4
3,940,791	+				-0.3
3,940,791	+				-0.3
3,940,791	+				-0.1
3,940,847	+				+0.0
3,940,847	+				+1.2
3,940,847	+				+0.0
3,940,847	+				+0.2
3,940,847	+				-1.5
3,940,847	+				-0.2
3,940,847	+				+0.8
3,940,848	-				+1.5
3,940,937	+		Psest_3774	0.43	-0.8
3,941,135	+				-0.2
3,941,135	+				+4.0
3,941,135	+				+1.8
3,941,135	+				+0.7
3,941,135	+				-1.2
3,941,136	-				-1.8
3,941,136	-				-1.4
3,941,136	-				-1.1
3,941,136	-				+1.6
3,941,136	-				-1.1
3,941,142	+				-0.6
3,941,585	-		Psest_3775	0.31	+0.4
3,941,647	+		Psest_3775	0.35	-1.2
3,941,648	-		Psest_3775	0.35	-0.7
3,941,648	-		Psest_3775	0.35	+0.3
3,941,648	-		Psest_3775	0.35	-1.1
3,941,648	-		Psest_3775	0.35	-0.6
3,941,648	-		Psest_3775	0.35	-0.6
3,941,648	-		Psest_3775	0.35	+1.4
3,941,648	-		Psest_3775	0.35	-1.2
3,941,648	-		Psest_3775	0.35	-2.0
3,942,050	+		Psest_3775	0.62	-1.1
3,942,050	+		Psest_3775	0.62	+4.4
3,942,051	-		Psest_3775	0.62	+0.3