Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3183

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,354,196	+		Psest_3182	0.17	-1.4
3,354,340	+		Psest_3182	0.31	+0.2
3,354,340	+		Psest_3182	0.31	-0.7
3,354,341	-		Psest_3182	0.32	+2.2
3,354,341	-		Psest_3182	0.32	+2.0
3,354,341	-		Psest_3182	0.32	+2.8
3,354,341	-		Psest_3182	0.32	-1.0
3,354,368	-		Psest_3182	0.34	-0.6
3,354,400	+		Psest_3182	0.38	-0.1
3,354,400	+		Psest_3182	0.38	-1.1
3,354,401	-		Psest_3182	0.38	-2.3
3,354,401	-		Psest_3182	0.38	+1.0
3,354,401	-		Psest_3182	0.38	-1.0
3,354,401	-		Psest_3182	0.38	+1.0
3,354,401	-		Psest_3182	0.38	-1.4
3,354,401	-		Psest_3182	0.38	+0.2
3,354,421	+		Psest_3182	0.40	+1.0
3,354,421	+		Psest_3182	0.40	+0.8
3,354,422	-		Psest_3182	0.40	-0.5
3,354,422	-		Psest_3182	0.40	-0.7
3,354,466	+		Psest_3182	0.44	-1.8
3,354,466	+		Psest_3182	0.44	+1.0
3,354,467	-		Psest_3182	0.44	+0.4
3,354,467	-		Psest_3182	0.44	-1.6
3,354,467	-		Psest_3182	0.44	+1.5
3,354,467	-		Psest_3182	0.44	+0.1
3,354,467	-		Psest_3182	0.44	-1.0
3,354,539	-		Psest_3182	0.52	-2.9
3,354,541	+		Psest_3182	0.52	-1.0
3,354,541	+		Psest_3182	0.52	-1.2
3,354,541	+		Psest_3182	0.52	-0.9
3,354,541	+		Psest_3182	0.52	-0.1
3,354,542	-		Psest_3182	0.52	-0.3
3,354,542	-		Psest_3182	0.52	-1.2
3,354,542	-		Psest_3182	0.52	-0.5
3,354,542	-		Psest_3182	0.52	-2.0
3,354,542	-		Psest_3182	0.52	-2.4
3,354,542	-		Psest_3182	0.52	-0.3
3,354,542	-		Psest_3182	0.52	-0.5
3,354,542	-		Psest_3182	0.52	+0.6
3,354,542	-		Psest_3182	0.52	+0.9
3,354,542	-		Psest_3182	0.52	-2.6
3,354,542	-		Psest_3182	0.52	+1.7
3,354,542	-		Psest_3182	0.52	-0.2
3,354,542	-		Psest_3182	0.52	-0.5
3,354,542	-		Psest_3182	0.52	+1.0
3,354,542	-		Psest_3182	0.52	+2.6
3,354,542	-		Psest_3182	0.52	-0.0
3,354,542	-		Psest_3182	0.52	+1.7
3,354,542	-		Psest_3182	0.52	-1.3
3,354,836	+		Psest_3182	0.82	-1.2
3,354,836	+		Psest_3182	0.82	-0.1
3,354,836	+		Psest_3182	0.82	-1.6
3,354,836	+		Psest_3182	0.82	-1.2
3,354,836	+		Psest_3182	0.82	-1.8
3,354,837	-		Psest_3182	0.82	-0.8
3,354,837	-		Psest_3182	0.82	+0.1
3,354,837	-		Psest_3182	0.82	-0.7
3,354,837	-		Psest_3182	0.82	+2.0
3,354,932	-				-1.5
3,354,932	-				+0.3
3,354,932	-				-0.7
3,354,932	-				+2.2
3,354,938	+				-0.0
3,354,938	+				+1.8
3,354,938	+				+1.3
3,354,938	+				+0.4
3,354,938	+				-1.2
3,354,938	+				+0.6
3,354,938	+				+2.0
3,354,939	-				+0.0
3,354,939	-				+0.9
3,354,939	-				-0.1
3,354,939	-				-2.7
3,354,939	-				-0.1
3,354,939	-				-0.9
3,354,939	-				-2.8
3,354,939	-				-3.0
3,354,970	+				+2.5
3,354,970	+				+2.5
3,354,970	+				-0.3
3,355,176	+		Psest_3183	0.11	-2.9
3,355,177	-		Psest_3183	0.12	-0.2
3,355,206	-		Psest_3183	0.13	-0.1
3,355,206	-		Psest_3183	0.13	-1.8
3,355,206	-		Psest_3183	0.13	-1.1
3,355,226	-		Psest_3183	0.15	-1.6
3,355,512	-		Psest_3183	0.33	-2.0
3,355,600	-		Psest_3183	0.39	-0.4
3,355,600	-		Psest_3183	0.39	-0.6
3,355,613	+		Psest_3183	0.40	-0.7
3,355,613	+		Psest_3183	0.40	+0.0
3,355,613	+		Psest_3183	0.40	-0.7
3,355,613	+		Psest_3183	0.40	-0.3
3,355,613	+		Psest_3183	0.40	+0.1
3,355,646	+		Psest_3183	0.42	-0.7
3,355,646	+		Psest_3183	0.42	+0.1
3,355,647	-		Psest_3183	0.42	-1.6
3,356,167	-		Psest_3183	0.75	-0.4
3,356,167	-		Psest_3183	0.75	+0.4
3,356,248	+		Psest_3183	0.80	-0.7
3,356,309	+		Psest_3183	0.84	-0.2
3,356,466	-				-0.8
3,356,639	-				-1.4
3,356,706	-		Psest_3184	0.13	-1.6
3,357,034	+		Psest_3184	0.41	+1.2
3,357,035	-		Psest_3184	0.42	-2.4
3,357,227	-		Psest_3184	0.58	+1.4
3,357,250	+		Psest_3184	0.60	-0.6
3,357,250	+		Psest_3184	0.60	-0.7
3,357,251	-		Psest_3184	0.60	+1.7
3,357,326	-		Psest_3184	0.66	+1.0
3,357,362	+		Psest_3184	0.69	-0.6
3,357,362	+		Psest_3184	0.69	-0.4
3,357,363	-		Psest_3184	0.69	-0.9
3,357,363	-		Psest_3184	0.69	-0.8
3,357,363	-		Psest_3184	0.69	-0.3
3,357,363	-		Psest_3184	0.69	-1.4
3,357,449	+		Psest_3184	0.77	+1.0
3,357,450	-		Psest_3184	0.77	+0.3