Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2710

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,899,808	-		Psest_2708	0.53	-0.2
2,899,839	+		Psest_2708	0.57	+0.8
2,899,839	+		Psest_2708	0.57	+0.5
2,899,839	+		Psest_2708	0.57	+2.0
2,899,839	+		Psest_2708	0.57	-0.2
2,899,840	-		Psest_2708	0.57	-1.9
2,899,840	-		Psest_2708	0.57	+0.6
2,899,840	-		Psest_2708	0.57	+0.4
2,899,840	-		Psest_2708	0.57	-0.9
2,899,848	+		Psest_2708	0.58	+0.2
2,899,848	+		Psest_2708	0.58	-1.8
2,899,849	-		Psest_2708	0.58	+0.5
2,899,872	+		Psest_2708	0.60	-2.1
2,899,917	+		Psest_2708	0.65	+0.1
2,899,917	+		Psest_2708	0.65	-1.2
2,899,917	+		Psest_2708	0.65	-1.1
2,899,917	+		Psest_2708	0.65	+0.6
2,899,917	+		Psest_2708	0.65	+0.2
2,899,918	-		Psest_2708	0.65	+0.8
2,899,918	-		Psest_2708	0.65	+0.7
2,899,918	-		Psest_2708	0.65	+0.7
2,899,923	+		Psest_2708	0.66	+0.6
2,899,924	-		Psest_2708	0.66	-2.5
2,899,926	+		Psest_2708	0.66	+0.1
2,899,926	+		Psest_2708	0.66	-0.6
2,899,926	+		Psest_2708	0.66	-2.7
2,899,926	+		Psest_2708	0.66	-0.5
2,899,927	-		Psest_2708	0.66	-1.0
2,899,927	-		Psest_2708	0.66	+2.2
2,899,941	+		Psest_2708	0.68	-2.4
2,899,941	+		Psest_2708	0.68	-1.0
2,901,899	-				+1.9
2,901,911	-				+3.0
2,901,911	-				-0.7
2,901,973	-				-0.4
2,902,002	-				+0.3
2,902,059	+				+3.0
2,902,059	+				+3.7
2,902,061	+				-0.7
2,902,081	+				-1.3
2,902,081	+				-2.3
2,902,081	+				-1.0
2,902,081	+				+2.6
2,902,081	+				-1.6
2,902,081	+				+0.9
2,902,081	+				-0.0
2,902,081	+				+0.2
2,902,081	+				+1.3
2,902,081	+				+1.0
2,902,082	-				+0.9
2,902,082	-				+1.8
2,902,083	+				+1.1
2,902,083	+				-1.4
2,902,083	+				+1.7
2,902,083	+				-2.4
2,902,083	+				-1.5
2,902,083	+				-1.1
2,902,083	+				+0.8
2,902,119	+				-0.7
2,902,120	-				+2.6
2,902,139	+		Psest_2711	0.14	-0.2
2,902,185	-		Psest_2711	0.29	+0.6
2,902,213	+		Psest_2711	0.38	-2.3
2,902,214	-		Psest_2711	0.39	-0.6
2,902,406	+				-0.3
2,902,406	+				+2.6
2,902,406	+				-1.4
2,902,407	-				+0.8
2,902,407	-				+1.1
2,902,408	+				-0.8
2,902,408	+				-0.3
2,902,408	+				-1.3
2,902,408	+				-1.4
2,902,408	+				+2.2
2,902,408	+				-3.5
2,902,409	-				-0.4
2,902,409	-				-0.4
2,902,409	-				-1.1
2,902,409	-				-0.6
2,902,409	-				+0.6
2,902,409	-				-1.1
2,902,409	-				+0.1
2,902,409	-				+0.3
2,902,409	-				+0.6
2,902,409	-				-1.1
2,902,409	-				+1.0
2,902,409	-				-0.8
2,902,409	-				-1.3
2,902,671	-		Psest_2712	0.33	-1.6
2,902,671	-		Psest_2712	0.33	-2.3
2,902,671	-		Psest_2712	0.33	-1.4
2,902,671	-		Psest_2712	0.33	-1.7
2,902,699	+		Psest_2712	0.37	-1.8
2,902,700	-		Psest_2712	0.38	-2.6