Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2482

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,653,624	-		Psest_2480	0.82	-0.6
2,653,986	-				-1.3
2,654,023	+				+1.7
2,654,024	-				+0.7
2,654,218	-		Psest_2481	0.31	+1.8
2,654,218	-		Psest_2481	0.31	+0.2
2,654,218	-		Psest_2481	0.31	-0.1
2,654,276	-		Psest_2481	0.43	-0.4
2,654,276	-		Psest_2481	0.43	-1.5
2,654,276	-		Psest_2481	0.43	-1.7
2,654,276	-		Psest_2481	0.43	-0.3
2,654,424	+		Psest_2481	0.75	+0.4
2,654,424	+		Psest_2481	0.75	-0.4
2,654,424	+		Psest_2481	0.75	+0.6
2,654,424	+		Psest_2481	0.75	+0.9
2,654,472	+		Psest_2481	0.85	+1.8
2,654,485	-		Psest_2481	0.88	+0.4
2,654,485	-		Psest_2481	0.88	-0.8
2,654,487	+		Psest_2481	0.88	-0.9
2,654,529	+				-0.1
2,654,529	+				+1.7
2,654,530	-				+2.5
2,654,530	-				-1.9
2,654,574	+				+0.5
2,654,574	+				-0.4
2,654,575	-				-0.4
2,654,717	+		Psest_2482	0.11	+0.3
2,654,836	+		Psest_2482	0.23	-1.8
2,654,836	+		Psest_2482	0.23	-2.4
2,654,837	-		Psest_2482	0.23	+2.5
2,654,869	+		Psest_2482	0.26	-0.4
2,654,869	+		Psest_2482	0.26	+2.5
2,654,869	+		Psest_2482	0.26	-0.1
2,654,870	-		Psest_2482	0.26	-1.2
2,654,870	-		Psest_2482	0.26	+2.1
2,654,870	-		Psest_2482	0.26	-3.0
2,654,870	-		Psest_2482	0.26	+0.0
2,655,104	-		Psest_2482	0.49	-1.0
2,655,104	-		Psest_2482	0.49	+1.4
2,655,362	-		Psest_2482	0.74	-2.0
2,655,362	-		Psest_2482	0.74	-0.5
2,655,362	-		Psest_2482	0.74	+3.9
2,655,385	+		Psest_2482	0.76	+1.8
2,655,526	+		Psest_2482	0.90	+2.5
2,655,526	+		Psest_2482	0.90	-0.0
2,655,526	+		Psest_2482	0.90	-0.5
2,655,526	+		Psest_2482	0.90	-0.4
2,655,526	+		Psest_2482	0.90	-0.9
2,655,545	+				+3.1
2,655,546	-				+0.7
2,655,576	+				+0.8
2,655,577	-				+0.1
2,655,625	+				+1.9
2,655,626	-				-1.4
2,655,626	-				+0.3
2,655,657	+				-3.1
2,655,714	-				+0.5
2,655,728	-				+1.0
2,655,777	+				-1.1
2,655,777	+				+1.2
2,655,777	+				+1.2
2,655,777	+				-1.6
2,655,777	+				+0.6
2,655,777	+				+3.1
2,655,777	+				-3.2
2,655,777	+				+0.1
2,655,778	-				-0.9
2,655,778	-				-0.6
2,655,778	-				-1.2
2,655,778	-				+2.0
2,655,778	-				-1.2
2,655,778	-				+1.2
2,655,778	-				-0.6
2,655,778	-				-0.4
2,655,778	-				-0.1
2,655,778	-				-1.1
2,655,780	+				+1.0
2,655,855	+				+0.5
2,655,855	+				+0.3
2,655,855	+				-1.0
2,655,855	+				+0.8
2,655,855	+				-1.0
2,655,856	-				+0.6
2,655,856	-				+0.8
2,655,977	+		Psest_2483	0.27	-0.8
2,655,977	+		Psest_2483	0.27	-0.5
2,655,978	-		Psest_2483	0.27	+0.0
2,655,978	-		Psest_2483	0.27	-0.1
2,656,034	+		Psest_2483	0.40	-1.3
2,656,035	-		Psest_2483	0.40	-0.5
2,656,035	-		Psest_2483	0.40	-0.7
2,656,035	-		Psest_2483	0.40	-0.2
2,656,290	-				-1.0
2,656,393	+				+0.0
2,656,393	+				-0.8
2,656,393	+				+0.7
2,656,394	-				+1.8
2,656,394	-				-0.8
2,656,394	-				+1.0
2,656,394	-				+2.4
2,656,397	+				+1.0
2,656,397	+				+2.6
2,656,397	+				-2.1
2,656,398	-				+1.9