Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2060

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,184,097	+		Psest_2059	0.50	+0.3
2,184,098	-		Psest_2059	0.50	-0.5
2,184,137	-		Psest_2059	0.53	-0.9
2,184,223	+		Psest_2059	0.60	-2.0
2,184,224	-		Psest_2059	0.60	+0.3
2,184,367	+		Psest_2059	0.72	-0.7
2,184,368	-		Psest_2059	0.72	+1.2
2,184,610	+				-1.1
2,184,610	+				-3.7
2,184,610	+				+0.8
2,184,610	+				+0.6
2,184,611	-				+0.4
2,184,611	-				+1.0
2,184,611	-				-0.0
2,184,611	-				+0.2
2,184,611	-				-2.9
2,184,629	-				-0.3
2,184,678	-				+1.2
2,184,777	+				+0.6
2,184,777	+				+0.8
2,184,777	+				-0.4
2,184,868	+				+0.4
2,184,868	+				+0.6
2,184,886	-				-0.1
2,184,967	+				+0.7
2,184,967	+				+1.2
2,184,968	-				-0.5
2,185,286	+		Psest_2060	0.16	-1.3
2,185,286	+		Psest_2060	0.16	-1.7
2,185,286	+		Psest_2060	0.16	+1.2
2,185,286	+		Psest_2060	0.16	+0.9
2,185,287	-		Psest_2060	0.16	-0.5
2,185,287	-		Psest_2060	0.16	+2.2
2,185,352	+		Psest_2060	0.20	+0.2
2,185,352	+		Psest_2060	0.20	+0.1
2,185,418	+		Psest_2060	0.24	+1.1
2,185,419	-		Psest_2060	0.24	-0.9
2,185,515	-		Psest_2060	0.29	-3.4
2,185,515	-		Psest_2060	0.29	+0.7
2,185,619	+		Psest_2060	0.35	-2.2
2,185,619	+		Psest_2060	0.35	-0.4
2,185,619	+		Psest_2060	0.35	+3.2
2,185,679	+		Psest_2060	0.38	+0.5
2,185,794	-		Psest_2060	0.45	-0.9
2,185,797	-		Psest_2060	0.45	+0.0
2,185,880	+		Psest_2060	0.50	-1.8
2,185,881	-		Psest_2060	0.50	-0.9
2,185,997	+		Psest_2060	0.56	+2.0
2,186,057	+		Psest_2060	0.60	-2.2
2,186,057	+		Psest_2060	0.60	+0.1
2,186,058	-		Psest_2060	0.60	+0.8
2,186,058	-		Psest_2060	0.60	-0.9
2,186,061	+		Psest_2060	0.60	+0.3
2,186,061	+		Psest_2060	0.60	-0.0
2,186,152	+		Psest_2060	0.65	-2.9
2,186,156	+		Psest_2060	0.65	+0.1
2,186,156	+		Psest_2060	0.65	+1.5
2,186,156	+		Psest_2060	0.65	-1.0
2,186,157	-		Psest_2060	0.65	+0.2
2,186,264	+		Psest_2060	0.71	+0.4
2,186,288	+		Psest_2060	0.73	+0.9
2,186,288	+		Psest_2060	0.73	+1.0
2,186,288	+		Psest_2060	0.73	-0.6
2,186,288	+		Psest_2060	0.73	+2.1
2,186,288	+		Psest_2060	0.73	+1.6
2,186,289	-		Psest_2060	0.73	+1.3
2,186,289	-		Psest_2060	0.73	-1.4
2,186,289	-		Psest_2060	0.73	+0.3
2,186,289	-		Psest_2060	0.73	+2.4
2,186,289	-		Psest_2060	0.73	+1.2
2,186,289	-		Psest_2060	0.73	+0.5
2,186,357	+		Psest_2060	0.77	+1.6
2,186,399	+		Psest_2060	0.79	-1.2
2,186,399	+		Psest_2060	0.79	+0.3
2,186,400	-		Psest_2060	0.79	+3.9
2,186,400	-		Psest_2060	0.79	-0.8
2,186,400	-		Psest_2060	0.79	-0.2
2,186,400	-		Psest_2060	0.79	-2.0
2,186,400	-		Psest_2060	0.79	+1.2
2,186,462	+		Psest_2060	0.82	+2.3
2,186,463	-		Psest_2060	0.83	-1.1
2,186,463	-		Psest_2060	0.83	+3.4
2,186,463	-		Psest_2060	0.83	-0.1
2,186,532	-		Psest_2060	0.86	+2.0
2,186,636	+				-0.6
2,186,636	+				+1.9
2,186,636	+				-1.0
2,186,636	+				-0.5
2,186,636	+				-1.9
2,186,637	-				-0.2
2,186,941	-				+2.6
2,187,027	+		Psest_2061	0.19	+1.6
2,187,027	+		Psest_2061	0.19	-1.0
2,187,028	-		Psest_2061	0.20	-2.7
2,187,028	-		Psest_2061	0.20	-2.2
2,187,028	-		Psest_2061	0.20	-0.8
2,187,172	-		Psest_2061	0.37	-1.5
2,187,172	-		Psest_2061	0.37	-0.3
2,187,172	-		Psest_2061	0.37	-2.3
2,187,172	-		Psest_2061	0.37	+0.7
2,187,433	-		Psest_2061	0.68	+1.7
2,187,486	+		Psest_2061	0.74	-1.1
2,187,754	+				+1.4
2,187,754	+				-0.6
2,187,754	+				+1.2
2,187,755	-				-0.6