Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1310

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
1,409,830	+				+0.0
1,409,865	+				-1.3
1,409,865	+				+0.4
1,409,865	+				-1.1
1,409,865	+				+0.0
1,409,865	+				-0.9
1,409,866	-				-1.1
1,409,866	-				+1.7
1,409,958	+		Psest_1309	0.12	-0.7
1,409,958	+		Psest_1309	0.12	+1.6
1,409,958	+		Psest_1309	0.12	-2.8
1,409,958	+		Psest_1309	0.12	-1.3
1,409,958	+		Psest_1309	0.12	-1.6
1,409,958	+		Psest_1309	0.12	+0.1
1,409,958	+		Psest_1309	0.12	-0.2
1,409,958	+		Psest_1309	0.12	-2.3
1,409,959	-		Psest_1309	0.12	-2.5
1,409,959	-		Psest_1309	0.12	-0.9
1,409,959	-		Psest_1309	0.12	-0.3
1,409,959	-		Psest_1309	0.12	-0.5
1,409,959	-		Psest_1309	0.12	+0.9
1,409,959	-		Psest_1309	0.12	+0.6
1,409,959	-		Psest_1309	0.12	-0.3
1,409,959	-		Psest_1309	0.12	+0.5
1,409,959	-		Psest_1309	0.12	-0.6
1,409,959	-		Psest_1309	0.12	-2.1
1,409,959	-		Psest_1309	0.12	-0.4
1,409,959	-		Psest_1309	0.12	+1.3
1,409,959	-		Psest_1309	0.12	+1.2
1,410,166	-		Psest_1309	0.39	-1.2
1,410,302	-		Psest_1309	0.57	+0.5
1,410,383	+		Psest_1309	0.68	-0.4
1,410,384	-		Psest_1309	0.68	-0.1
1,410,469	-		Psest_1309	0.79	+2.5
1,410,548	+		Psest_1309	0.89	-1.7
1,410,549	-		Psest_1309	0.89	-1.7
1,410,608	+				-1.1
1,411,118	+		Psest_1310	0.39	-0.9
1,411,118	+		Psest_1310	0.39	-1.0
1,411,119	-		Psest_1310	0.39	+1.7
1,411,403	+		Psest_1310	0.62	+0.6
1,411,403	+		Psest_1310	0.62	+0.0
1,411,421	+		Psest_1310	0.63	+0.2
1,411,421	+		Psest_1310	0.63	-2.3
1,411,421	+		Psest_1310	0.63	-0.8
1,411,421	+		Psest_1310	0.63	-1.1
1,411,422	-		Psest_1310	0.63	+0.2
1,411,422	-		Psest_1310	0.63	-1.9
1,411,422	-		Psest_1310	0.63	+1.2
1,411,422	-		Psest_1310	0.63	-0.8
1,411,422	-		Psest_1310	0.63	-0.1
1,411,422	-		Psest_1310	0.63	-1.3
1,411,422	-		Psest_1310	0.63	-2.3
1,411,442	+		Psest_1310	0.65	-2.6
1,411,443	-		Psest_1310	0.65	-1.3
1,411,454	+		Psest_1310	0.66	-1.9
1,411,517	+		Psest_1310	0.71	-0.8
1,411,518	-		Psest_1310	0.71	+0.2
1,411,518	-		Psest_1310	0.71	-1.1
1,411,518	-		Psest_1310	0.71	-0.9
1,411,562	+		Psest_1310	0.74	+0.0
1,411,884	+				-0.5
1,411,885	-				+0.7
1,411,948	-				+3.3
1,411,972	+				-0.8
1,411,972	+				+0.4
1,411,972	+				-1.8
1,411,973	-				-1.3
1,412,019	+		Psest_1311	0.15	-0.8
1,412,020	-		Psest_1311	0.15	-0.8
1,412,020	-		Psest_1311	0.15	-0.1
1,412,020	-		Psest_1311	0.15	+0.4
1,412,020	-		Psest_1311	0.15	+1.1
1,412,020	-		Psest_1311	0.15	-0.9
1,412,302	+		Psest_1311	0.46	+1.3
1,412,302	+		Psest_1311	0.46	+0.8
1,412,302	+		Psest_1311	0.46	+0.4
1,412,303	-		Psest_1311	0.46	+1.1
1,412,303	-		Psest_1311	0.46	+0.3
1,412,344	+		Psest_1311	0.50	+1.4
1,412,344	+		Psest_1311	0.50	+1.6
1,412,344	+		Psest_1311	0.50	+0.9
1,412,345	-		Psest_1311	0.50	+1.2
1,412,345	-		Psest_1311	0.50	-2.5
1,412,345	-		Psest_1311	0.50	-1.4
1,412,345	-		Psest_1311	0.50	-1.8
1,412,345	-		Psest_1311	0.50	-0.9
1,412,653	+		Psest_1311	0.84	+1.5
1,412,653	+		Psest_1311	0.84	-0.2
1,412,653	+		Psest_1311	0.84	+1.4
1,412,653	+		Psest_1311	0.84	-0.3
1,412,653	+		Psest_1311	0.84	-0.7
1,412,653	+		Psest_1311	0.84	-0.6
1,412,654	-		Psest_1311	0.84	-1.8
1,412,654	-		Psest_1311	0.84	-2.5
1,412,654	-		Psest_1311	0.84	+1.4
1,412,654	-		Psest_1311	0.84	+0.8
1,412,654	-		Psest_1311	0.84	+0.1
1,412,668	+		Psest_1311	0.85	+0.8
1,412,668	+		Psest_1311	0.85	+1.4
1,412,668	+		Psest_1311	0.85	+2.5
1,412,668	+		Psest_1311	0.85	-1.1
1,412,668	+		Psest_1311	0.85	-1.0
1,412,668	+		Psest_1311	0.85	-0.9
1,412,668	+		Psest_1311	0.85	-2.2
1,412,668	+		Psest_1311	0.85	-0.9
1,412,668	+		Psest_1311	0.85	+0.2
1,412,668	+		Psest_1311	0.85	-2.0
1,412,669	-		Psest_1311	0.85	+1.2
1,412,669	-		Psest_1311	0.85	+1.0
1,412,669	-		Psest_1311	0.85	+0.1
1,412,669	-		Psest_1311	0.85	-2.8
1,412,669	-		Psest_1311	0.85	-0.8
1,412,669	-		Psest_1311	0.85	+0.9
1,412,669	-		Psest_1311	0.85	-2.7
1,412,669	-		Psest_1311	0.85	+2.0
1,412,669	-		Psest_1311	0.85	+3.2
1,412,669	-		Psest_1311	0.85	-1.6
1,412,669	-		Psest_1311	0.85	+0.1
1,412,669	-		Psest_1311	0.85	-2.6
1,412,711	-		Psest_1311	0.90	+0.9
1,412,711	-		Psest_1311	0.90	-0.2
1,412,744	-				-1.1
1,412,781	+				-3.2
1,412,781	+				+0.6
1,412,781	+				-1.7
1,412,781	+				-0.7
1,412,782	-				+1.1
1,412,782	-				+0.3
1,412,782	-				+2.3
1,412,782	-				-3.1
1,412,782	-				-1.2
1,412,782	-				+0.9
1,412,782	-				+2.4
1,412,785	+				+0.8
1,412,791	+				-0.7
1,412,792	-				-1.8