Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1199

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
1,301,820	-		Psest_1198	0.15	-2.3
1,301,820	-		Psest_1198	0.15	+0.0
1,301,878	-		Psest_1198	0.21	+0.2
1,301,878	-		Psest_1198	0.21	+0.3
1,301,878	-		Psest_1198	0.21	+3.5
1,302,348	+		Psest_1198	0.68	-0.9
1,302,348	+		Psest_1198	0.68	-1.8
1,302,348	+		Psest_1198	0.68	+1.3
1,302,349	-		Psest_1198	0.68	-0.3
1,302,349	-		Psest_1198	0.68	+0.3
1,302,349	-		Psest_1198	0.68	+0.8
1,302,349	-		Psest_1198	0.68	-1.2
1,302,349	-		Psest_1198	0.68	-1.3
1,302,349	-		Psest_1198	0.68	+0.7
1,302,460	-		Psest_1198	0.79	+1.5
1,302,636	+				+3.6
1,302,700	+				-0.5
1,302,700	+				-0.3
1,302,700	+				+0.6
1,302,701	-				-1.3
1,302,701	-				-0.2
1,302,701	-				-0.9
1,302,729	+				+2.1
1,302,729	+				+0.0
1,302,729	+				-1.9
1,302,729	+				-3.1
1,302,729	+				+2.0
1,302,729	+				+1.3
1,302,730	-				+0.8
1,302,894	+		Psest_1199	0.32	+1.1
1,302,895	-		Psest_1199	0.32	-1.6
1,302,895	-		Psest_1199	0.32	-2.1
1,302,895	-		Psest_1199	0.32	+1.5
1,302,895	-		Psest_1199	0.32	+0.9
1,303,107	+		Psest_1199	0.73	+2.0
1,303,170	+		Psest_1199	0.86	-0.1
1,303,170	+		Psest_1199	0.86	+1.6
1,303,170	+		Psest_1199	0.86	+0.6
1,303,443	-		Psest_1200	0.22	+0.6
1,303,469	+		Psest_1200	0.25	-0.1
1,303,470	-		Psest_1200	0.25	-0.5
1,303,541	+		Psest_1200	0.32	-0.3
1,303,541	+		Psest_1200	0.32	+0.3
1,303,607	+		Psest_1200	0.39	-1.2
1,303,607	+		Psest_1200	0.39	-0.2
1,303,608	-		Psest_1200	0.39	+1.1
1,303,608	-		Psest_1200	0.39	-0.3
1,303,623	-		Psest_1200	0.41	+0.7
1,303,682	+		Psest_1200	0.47	+0.4
1,303,683	-		Psest_1200	0.47	-1.7
1,303,683	-		Psest_1200	0.47	-1.7
1,303,683	-		Psest_1200	0.47	+0.9
1,303,949	+		Psest_1200	0.76	-0.9
1,303,949	+		Psest_1200	0.76	+2.2
1,303,949	+		Psest_1200	0.76	-1.1
1,303,949	+		Psest_1200	0.76	-2.0
1,303,949	+		Psest_1200	0.76	-0.1
1,304,069	+		Psest_1200	0.89	-2.0
1,304,070	-		Psest_1200	0.89	-0.7
1,304,159	+				+1.5
1,304,188	-				+2.0