Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1169

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
1,269,060	-				+1.0
1,269,300	+		Psest_1168	0.29	+1.5
1,269,894	-				-1.2
1,270,015	+				+1.1
1,270,016	-				+2.0
1,270,016	-				+1.0
1,270,076	+				+3.1
1,270,076	+				-2.4
1,270,076	+				-0.2
1,270,076	+				+0.9
1,270,076	+				-2.3
1,270,076	+				-0.8
1,270,076	+				-1.0
1,270,077	-				-0.3
1,270,077	-				-2.3
1,270,077	-				-1.5
1,270,077	-				+0.1
1,270,078	+				-0.8
1,270,078	+				-1.2
1,270,078	+				+3.2
1,270,078	+				-0.7
1,270,078	+				+0.2
1,270,078	+				-0.1
1,270,078	+				-0.3
1,270,078	+				-1.6
1,270,078	+				-2.1
1,270,078	+				-0.8
1,270,078	+				+1.5
1,270,078	+				-0.1
1,270,079	-				+0.9
1,270,079	-				+1.9
1,270,079	-				+0.2
1,270,079	-				+1.7
1,270,079	-				-0.9
1,270,079	-				+0.1
1,270,079	-				-1.9
1,270,079	-				-2.4
1,270,079	-				+2.5
1,270,079	-				-0.3
1,270,079	-				-0.5
1,270,079	-				-0.3
1,270,289	-		Psest_1169	0.14	+0.8
1,270,342	+		Psest_1169	0.17	-1.3
1,270,342	+		Psest_1169	0.17	-1.0
1,270,342	+		Psest_1169	0.17	+0.6
1,270,342	+		Psest_1169	0.17	+0.9
1,270,342	+		Psest_1169	0.17	-0.7
1,270,343	-		Psest_1169	0.17	-0.3
1,270,378	+		Psest_1169	0.19	-0.3
1,270,403	-		Psest_1169	0.20	-0.9
1,270,431	+		Psest_1169	0.22	+2.4
1,270,431	+		Psest_1169	0.22	-0.8
1,270,431	+		Psest_1169	0.22	-0.9
1,270,431	+		Psest_1169	0.22	+1.4
1,270,432	-		Psest_1169	0.22	-0.3
1,270,432	-		Psest_1169	0.22	+1.2
1,270,432	-		Psest_1169	0.22	-0.5
1,270,652	-		Psest_1169	0.34	-1.0
1,270,970	-		Psest_1169	0.50	-2.5
1,271,062	+		Psest_1169	0.55	+1.8
1,271,062	+		Psest_1169	0.55	-2.3
1,271,063	-		Psest_1169	0.55	-0.2
1,271,063	-		Psest_1169	0.55	-0.7
1,271,063	-		Psest_1169	0.55	-1.6
1,271,200	+		Psest_1169	0.62	-0.5
1,271,200	+		Psest_1169	0.62	-0.2
1,271,200	+		Psest_1169	0.62	+1.6
1,271,200	+		Psest_1169	0.62	-0.4
1,271,200	+		Psest_1169	0.62	+0.5
1,271,200	+		Psest_1169	0.62	-3.3
1,271,200	+		Psest_1169	0.62	-1.4
1,271,200	+		Psest_1169	0.62	+2.0
1,271,200	+		Psest_1169	0.62	+1.3
1,271,200	+		Psest_1169	0.62	+0.2
1,271,200	+		Psest_1169	0.62	-1.2
1,271,200	+		Psest_1169	0.62	-1.8
1,271,201	-		Psest_1169	0.62	+0.4
1,271,201	-		Psest_1169	0.62	-1.5
1,271,201	-		Psest_1169	0.62	-0.3
1,271,201	-		Psest_1169	0.62	+0.2
1,271,201	-		Psest_1169	0.62	+0.5
1,271,201	-		Psest_1169	0.62	-1.9
1,271,252	+		Psest_1169	0.65	-1.0
1,271,253	-		Psest_1169	0.65	+0.6
1,271,270	-		Psest_1169	0.66	-0.3
1,271,270	-		Psest_1169	0.66	-0.2
1,271,283	-		Psest_1169	0.67	-0.1
1,271,285	+		Psest_1169	0.67	+0.2
1,271,285	+		Psest_1169	0.67	+2.1
1,271,286	-		Psest_1169	0.67	-1.3
1,271,339	-		Psest_1169	0.70	-1.0
1,271,444	-		Psest_1169	0.75	-0.0
1,271,444	-		Psest_1169	0.75	+1.3
1,271,446	+		Psest_1169	0.75	-1.5
1,271,446	+		Psest_1169	0.75	-0.4
1,271,447	-		Psest_1169	0.75	-0.2
1,271,486	-		Psest_1169	0.77	-1.6
1,271,581	+		Psest_1169	0.82	-1.7
1,271,581	+		Psest_1169	0.82	+0.6
1,271,582	-		Psest_1169	0.82	-1.3
1,271,582	-		Psest_1169	0.82	+0.6
1,271,582	-		Psest_1169	0.82	+0.1
1,271,582	-		Psest_1169	0.82	-1.1
1,271,582	-		Psest_1169	0.82	+1.0
1,271,707	+		Psest_1169	0.89	-1.8
1,271,707	+		Psest_1169	0.89	-0.6
1,271,707	+		Psest_1169	0.89	-1.4
1,271,707	+		Psest_1169	0.89	-0.5
1,271,707	+		Psest_1169	0.89	-2.5
1,271,707	+		Psest_1169	0.89	+0.3
1,271,707	+		Psest_1169	0.89	-0.8
1,271,708	-		Psest_1169	0.89	-1.6
1,271,708	-		Psest_1169	0.89	+0.4
1,271,708	-		Psest_1169	0.89	+0.7
1,271,708	-		Psest_1169	0.89	+1.4
1,272,004	+				+0.7
1,272,004	+				+2.7
1,272,004	+				+2.2
1,272,004	+				+0.6
1,272,004	+				-0.8
1,272,004	+				+2.3
1,272,004	+				-1.1
1,272,004	+				+1.1
1,272,004	+				+1.2
1,272,005	-				-2.5
1,272,005	-				+1.6
1,272,005	-				-0.4
1,272,005	-				-0.4
1,272,005	-				-0.7
1,272,005	-				+2.0
1,272,005	-				-0.6
1,272,005	-				+1.1
1,272,006	+				+2.3
1,272,007	-				-1.3
1,272,081	+				-3.8
1,272,082	-				+1.0
1,272,177	+				+0.4
1,272,262	-				+0.9
1,272,262	-				-1.3
1,272,595	+		Psest_1170	0.28	-1.4
1,272,620	+		Psest_1170	0.30	-0.9
1,272,620	+		Psest_1170	0.30	-0.2
1,272,621	-		Psest_1170	0.30	-1.7
1,272,627	+		Psest_1170	0.30	-1.1
1,272,627	+		Psest_1170	0.30	-1.7
1,272,627	+		Psest_1170	0.30	-1.3
1,272,627	+		Psest_1170	0.30	+1.4
1,272,627	+		Psest_1170	0.30	-2.9
1,272,627	+		Psest_1170	0.30	+0.4
1,272,627	+		Psest_1170	0.30	-2.0
1,272,627	+		Psest_1170	0.30	+0.3
1,272,627	+		Psest_1170	0.30	-0.3
1,272,627	+		Psest_1170	0.30	+1.0
1,272,628	-		Psest_1170	0.30	-1.7
1,272,628	-		Psest_1170	0.30	-2.5
1,272,628	-		Psest_1170	0.30	-1.0
1,272,628	-		Psest_1170	0.30	+2.9
1,272,628	-		Psest_1170	0.30	-1.9
1,272,628	-		Psest_1170	0.30	+0.7
1,272,628	-		Psest_1170	0.30	-0.7
1,272,629	+		Psest_1170	0.31	-0.5
1,272,629	+		Psest_1170	0.31	+1.0
1,272,807	+		Psest_1170	0.45	+2.2
1,272,808	-		Psest_1170	0.46	-1.1