Experiment: Benzethonium chloride 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0718 and Psest_0719 are separated by 48 nucleotides Psest_0719 and Psest_0720 are separated by 138 nucleotides Psest_0720 and Psest_0721 are separated by 45 nucleotides
Psest_0718: Psest_0718 - nicotinate-nucleotide pyrophosphorylase, at 787,802 to 788,650
_0718
Psest_0719: Psest_0719 - Uncharacterized protein conserved in bacteria, at 788,699 to 789,130
_0719
Psest_0720: Psest_0720 - Predicted hydrolase of the alpha/beta superfamily, at 789,269 to 789,895
_0720
Psest_0721: Psest_0721 - tryptophanyl-tRNA synthetase, at 789,941 to 791,299
_0721
Position (kb) 789
790 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 788.291 kb on + strand, within Psest_0718 at 788.291 kb on + strand, within Psest_0718 at 788.305 kb on + strand, within Psest_0718 at 788.305 kb on + strand, within Psest_0718 at 788.306 kb on - strand, within Psest_0718 at 788.447 kb on - strand, within Psest_0718 at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.582 kb on + strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.583 kb on - strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.584 kb on + strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.585 kb on - strand at 788.629 kb on - strand at 788.900 kb on + strand, within Psest_0719 at 788.900 kb on + strand, within Psest_0719 at 788.922 kb on + strand, within Psest_0719 at 788.923 kb on - strand, within Psest_0719 at 788.923 kb on - strand, within Psest_0719 at 788.926 kb on + strand, within Psest_0719 at 788.926 kb on + strand, within Psest_0719 at 788.926 kb on + strand, within Psest_0719 at 788.988 kb on + strand, within Psest_0719 at 788.989 kb on - strand, within Psest_0719 at 788.989 kb on - strand, within Psest_0719 at 788.989 kb on - strand, within Psest_0719 at 788.989 kb on - strand, within Psest_0719 at 789.031 kb on + strand, within Psest_0719 at 789.032 kb on - strand, within Psest_0719 at 789.032 kb on - strand, within Psest_0719 at 789.143 kb on + strand at 789.143 kb on + strand at 789.143 kb on + strand at 789.143 kb on + strand at 789.144 kb on - strand at 789.144 kb on - strand at 789.144 kb on - strand at 789.144 kb on - strand at 789.144 kb on - strand at 789.144 kb on - strand at 789.145 kb on + strand at 789.145 kb on + strand at 789.145 kb on + strand at 789.146 kb on - strand at 789.146 kb on - strand at 789.146 kb on - strand at 789.146 kb on - strand at 789.147 kb on + strand at 789.147 kb on + strand at 789.147 kb on + strand at 789.147 kb on + strand at 789.147 kb on + strand at 789.147 kb on + strand at 789.147 kb on + strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.148 kb on - strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.161 kb on + strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.162 kb on - strand at 789.176 kb on + strand at 789.187 kb on + strand at 789.188 kb on - strand at 789.188 kb on - strand at 789.188 kb on - strand at 789.188 kb on - strand at 789.188 kb on - strand at 789.188 kb on - strand at 789.188 kb on - strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.221 kb on + strand at 789.222 kb on - strand at 789.222 kb on - strand at 789.222 kb on - strand at 789.222 kb on - strand at 789.225 kb on + strand at 789.225 kb on + strand at 789.225 kb on + strand at 789.225 kb on + strand at 789.226 kb on - strand at 789.226 kb on - strand at 789.226 kb on - strand at 789.226 kb on - strand at 789.226 kb on - strand at 789.226 kb on - strand at 789.330 kb on - strand at 789.330 kb on - strand at 789.449 kb on + strand, within Psest_0720 at 789.470 kb on + strand, within Psest_0720 at 789.471 kb on - strand, within Psest_0720 at 789.777 kb on + strand, within Psest_0720 at 789.777 kb on + strand, within Psest_0720 at 789.778 kb on - strand, within Psest_0720 at 789.778 kb on - strand, within Psest_0720 at 789.778 kb on - strand, within Psest_0720 at 789.778 kb on - strand, within Psest_0720 at 789.779 kb on + strand, within Psest_0720 at 789.779 kb on + strand, within Psest_0720 at 789.779 kb on + strand, within Psest_0720 at 789.779 kb on + strand, within Psest_0720 at 789.779 kb on + strand, within Psest_0720 at 789.779 kb on + strand, within Psest_0720 at 789.780 kb on - strand, within Psest_0720 at 789.780 kb on - strand, within Psest_0720 at 789.780 kb on - strand, within Psest_0720 at 789.780 kb on - strand, within Psest_0720 at 789.780 kb on - strand, within Psest_0720 at 789.816 kb on + strand, within Psest_0720
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.01 mM remove 788,291 + Psest_0718 0.58 +0.7 788,291 + Psest_0718 0.58 -1.7 788,305 + Psest_0718 0.59 +0.7 788,305 + Psest_0718 0.59 +1.7 788,306 - Psest_0718 0.59 +0.3 788,447 - Psest_0718 0.76 +0.9 788,582 + +0.4 788,582 + +0.3 788,582 + +2.6 788,582 + -0.5 788,582 + +0.0 788,582 + +2.3 788,582 + +0.3 788,582 + +0.6 788,582 + -0.1 788,582 + +0.5 788,582 + +1.9 788,582 + +0.0 788,582 + +1.0 788,582 + +0.3 788,582 + +2.3 788,583 - -0.8 788,583 - -0.3 788,583 - +0.3 788,583 - -3.6 788,583 - -0.8 788,583 - +1.7 788,583 - +1.2 788,583 - +0.6 788,583 - +1.0 788,583 - -0.8 788,583 - -0.8 788,583 - -1.2 788,583 - +0.7 788,583 - +0.7 788,583 - +0.2 788,583 - +1.0 788,583 - +2.0 788,583 - +0.8 788,583 - +2.2 788,584 + -0.5 788,584 + +0.3 788,584 + +2.0 788,584 + -0.5 788,584 + +2.9 788,584 + +0.4 788,584 + -0.8 788,584 + +1.2 788,585 - -0.0 788,585 - +1.2 788,585 - -1.5 788,585 - -0.3 788,585 - +0.9 788,585 - -0.1 788,585 - +0.3 788,585 - +0.1 788,585 - +1.3 788,585 - +1.4 788,629 - +0.5 788,900 + Psest_0719 0.47 -0.1 788,900 + Psest_0719 0.47 +0.1 788,922 + Psest_0719 0.52 -0.7 788,923 - Psest_0719 0.52 -1.7 788,923 - Psest_0719 0.52 +2.2 788,926 + Psest_0719 0.53 -1.9 788,926 + Psest_0719 0.53 +0.5 788,926 + Psest_0719 0.53 -0.4 788,988 + Psest_0719 0.67 +2.7 788,989 - Psest_0719 0.67 +2.8 788,989 - Psest_0719 0.67 +3.5 788,989 - Psest_0719 0.67 -0.6 788,989 - Psest_0719 0.67 -0.3 789,031 + Psest_0719 0.77 -1.2 789,032 - Psest_0719 0.77 -0.2 789,032 - Psest_0719 0.77 -0.2 789,143 + -1.5 789,143 + -0.2 789,143 + -1.8 789,143 + +0.7 789,144 - +0.9 789,144 - +3.6 789,144 - +3.6 789,144 - +0.8 789,144 - -0.5 789,144 - -1.2 789,145 + +0.7 789,145 + +1.1 789,145 + -1.2 789,146 - +1.5 789,146 - +0.8 789,146 - +2.2 789,146 - +2.2 789,147 + +1.1 789,147 + +0.6 789,147 + -0.1 789,147 + -0.6 789,147 + +0.9 789,147 + -0.8 789,147 + +0.4 789,148 - +1.1 789,148 - -2.5 789,148 - +1.8 789,148 - -0.3 789,148 - +0.1 789,148 - -0.1 789,148 - -0.7 789,148 - -2.0 789,148 - -1.0 789,148 - +1.3 789,148 - -1.8 789,161 + -0.7 789,161 + -2.3 789,161 + -0.3 789,161 + -2.6 789,161 + +5.1 789,161 + +3.1 789,161 + -0.5 789,161 + -0.4 789,162 - -0.5 789,162 - +2.5 789,162 - +0.0 789,162 - -0.5 789,162 - -0.9 789,162 - -2.6 789,162 - +0.1 789,162 - -1.1 789,162 - +0.6 789,162 - +0.1 789,176 + -0.5 789,187 + +0.4 789,188 - +1.3 789,188 - +3.1 789,188 - -0.2 789,188 - +0.8 789,188 - +1.5 789,188 - -1.7 789,188 - -1.1 789,221 + -0.4 789,221 + +0.5 789,221 + +1.3 789,221 + -0.3 789,221 + +0.2 789,221 + +1.1 789,221 + +0.2 789,221 + +2.5 789,221 + +1.5 789,221 + -0.3 789,222 - +2.2 789,222 - +2.5 789,222 - +0.5 789,222 - +1.7 789,225 + +0.2 789,225 + -1.3 789,225 + +1.1 789,225 + +1.2 789,226 - +0.7 789,226 - +0.2 789,226 - -0.3 789,226 - +1.5 789,226 - +0.4 789,226 - +1.3 789,330 - -1.8 789,330 - -0.6 789,449 + Psest_0720 0.29 -0.2 789,470 + Psest_0720 0.32 +2.7 789,471 - Psest_0720 0.32 +0.5 789,777 + Psest_0720 0.81 +2.3 789,777 + Psest_0720 0.81 +0.4 789,778 - Psest_0720 0.81 +0.7 789,778 - Psest_0720 0.81 -0.3 789,778 - Psest_0720 0.81 +1.9 789,778 - Psest_0720 0.81 -0.1 789,779 + Psest_0720 0.81 -2.2 789,779 + Psest_0720 0.81 -0.6 789,779 + Psest_0720 0.81 +1.0 789,779 + Psest_0720 0.81 +2.2 789,779 + Psest_0720 0.81 +0.7 789,779 + Psest_0720 0.81 +0.5 789,780 - Psest_0720 0.81 +1.0 789,780 - Psest_0720 0.81 -0.1 789,780 - Psest_0720 0.81 +2.0 789,780 - Psest_0720 0.81 +3.0 789,780 - Psest_0720 0.81 +1.4 789,816 + Psest_0720 0.87 +0.2
Or see this region's nucleotide sequence