Experiment: Benzethonium chloride 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3541 and Psest_3542 are separated by 22 nucleotides Psest_3542 and Psest_3543 overlap by 1 nucleotides Psest_3543 and Psest_3544 overlap by 4 nucleotides
Psest_3541: Psest_3541 - Outer membrane cobalamin receptor protein, at 3,721,659 to 3,723,521
_3541
Psest_3542: Psest_3542 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 3,723,544 to 3,724,344
_3542
Psest_3543: Psest_3543 - hypothetical protein, at 3,724,344 to 3,724,751
_3543
Psest_3544: Psest_3544 - GTP cyclohydrolase II, at 3,724,748 to 3,725,365
_3544
Position (kb)
3723
3724
3725 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3722.599 kb on + strand, within Psest_3541 at 3722.600 kb on - strand, within Psest_3541 at 3722.652 kb on + strand, within Psest_3541 at 3722.653 kb on - strand, within Psest_3541 at 3722.653 kb on - strand, within Psest_3541 at 3722.830 kb on + strand, within Psest_3541 at 3722.830 kb on + strand, within Psest_3541 at 3722.831 kb on - strand, within Psest_3541 at 3722.859 kb on + strand, within Psest_3541 at 3722.955 kb on + strand, within Psest_3541 at 3722.955 kb on + strand, within Psest_3541 at 3722.955 kb on + strand, within Psest_3541 at 3722.955 kb on + strand, within Psest_3541 at 3722.955 kb on + strand, within Psest_3541 at 3722.956 kb on - strand, within Psest_3541 at 3722.956 kb on - strand, within Psest_3541 at 3722.956 kb on - strand, within Psest_3541 at 3723.009 kb on + strand, within Psest_3541 at 3723.010 kb on - strand, within Psest_3541 at 3723.010 kb on - strand, within Psest_3541 at 3723.176 kb on + strand, within Psest_3541 at 3723.177 kb on - strand, within Psest_3541 at 3723.414 kb on + strand at 3723.415 kb on - strand at 3723.415 kb on - strand at 3723.415 kb on - strand at 3723.415 kb on - strand at 3723.434 kb on + strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.435 kb on - strand at 3723.459 kb on + strand at 3723.459 kb on + strand at 3723.460 kb on - strand at 3723.520 kb on - strand at 3723.843 kb on + strand, within Psest_3542 at 3723.844 kb on - strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.845 kb on + strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.846 kb on - strand, within Psest_3542 at 3723.869 kb on + strand, within Psest_3542 at 3723.869 kb on + strand, within Psest_3542 at 3723.869 kb on + strand, within Psest_3542 at 3723.870 kb on - strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.895 kb on + strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.896 kb on - strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.899 kb on + strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3723.900 kb on - strand, within Psest_3542 at 3724.276 kb on + strand at 3724.330 kb on + strand at 3724.398 kb on + strand, within Psest_3543 at 3724.399 kb on - strand, within Psest_3543 at 3724.701 kb on - strand, within Psest_3543 at 3724.701 kb on - strand, within Psest_3543 at 3724.701 kb on - strand, within Psest_3543
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.01 mM remove 3,722,599 + Psest_3541 0.50 -1.4 3,722,600 - Psest_3541 0.51 -2.0 3,722,652 + Psest_3541 0.53 +1.8 3,722,653 - Psest_3541 0.53 -1.4 3,722,653 - Psest_3541 0.53 +1.5 3,722,830 + Psest_3541 0.63 +3.0 3,722,830 + Psest_3541 0.63 +1.0 3,722,831 - Psest_3541 0.63 -0.7 3,722,859 + Psest_3541 0.64 -0.9 3,722,955 + Psest_3541 0.70 +0.8 3,722,955 + Psest_3541 0.70 +1.4 3,722,955 + Psest_3541 0.70 -0.7 3,722,955 + Psest_3541 0.70 -0.2 3,722,955 + Psest_3541 0.70 -0.1 3,722,956 - Psest_3541 0.70 +1.1 3,722,956 - Psest_3541 0.70 +1.0 3,722,956 - Psest_3541 0.70 -1.4 3,723,009 + Psest_3541 0.72 -0.7 3,723,010 - Psest_3541 0.73 +0.8 3,723,010 - Psest_3541 0.73 +1.1 3,723,176 + Psest_3541 0.81 +1.1 3,723,177 - Psest_3541 0.81 +0.9 3,723,414 + +0.1 3,723,415 - +0.8 3,723,415 - -0.4 3,723,415 - +1.9 3,723,415 - +1.3 3,723,434 + -1.3 3,723,435 - +0.5 3,723,435 - +0.9 3,723,435 - +1.5 3,723,435 - +2.9 3,723,435 - -1.0 3,723,435 - -1.2 3,723,459 + -0.8 3,723,459 + +1.9 3,723,460 - -0.2 3,723,520 - -2.3 3,723,843 + Psest_3542 0.37 +0.2 3,723,844 - Psest_3542 0.37 -0.6 3,723,845 + Psest_3542 0.38 -1.8 3,723,845 + Psest_3542 0.38 -2.8 3,723,845 + Psest_3542 0.38 -0.8 3,723,845 + Psest_3542 0.38 -0.6 3,723,845 + Psest_3542 0.38 -0.2 3,723,846 - Psest_3542 0.38 -2.2 3,723,846 - Psest_3542 0.38 +1.5 3,723,846 - Psest_3542 0.38 +0.6 3,723,846 - Psest_3542 0.38 +0.4 3,723,846 - Psest_3542 0.38 -1.4 3,723,846 - Psest_3542 0.38 -0.4 3,723,846 - Psest_3542 0.38 +2.2 3,723,846 - Psest_3542 0.38 -0.5 3,723,846 - Psest_3542 0.38 -1.0 3,723,846 - Psest_3542 0.38 +1.3 3,723,869 + Psest_3542 0.41 -1.9 3,723,869 + Psest_3542 0.41 +0.1 3,723,869 + Psest_3542 0.41 +0.8 3,723,870 - Psest_3542 0.41 -1.2 3,723,895 + Psest_3542 0.44 -1.9 3,723,895 + Psest_3542 0.44 -0.9 3,723,895 + Psest_3542 0.44 +1.3 3,723,895 + Psest_3542 0.44 -0.9 3,723,895 + Psest_3542 0.44 -1.4 3,723,895 + Psest_3542 0.44 -2.1 3,723,896 - Psest_3542 0.44 +0.3 3,723,896 - Psest_3542 0.44 -0.8 3,723,896 - Psest_3542 0.44 +1.0 3,723,896 - Psest_3542 0.44 -0.6 3,723,896 - Psest_3542 0.44 -0.6 3,723,896 - Psest_3542 0.44 -0.8 3,723,896 - Psest_3542 0.44 -0.6 3,723,896 - Psest_3542 0.44 -0.1 3,723,896 - Psest_3542 0.44 -1.6 3,723,896 - Psest_3542 0.44 -2.8 3,723,896 - Psest_3542 0.44 -0.9 3,723,899 + Psest_3542 0.44 +2.5 3,723,899 + Psest_3542 0.44 -0.4 3,723,899 + Psest_3542 0.44 -0.0 3,723,899 + Psest_3542 0.44 -0.9 3,723,899 + Psest_3542 0.44 -1.8 3,723,899 + Psest_3542 0.44 +0.1 3,723,899 + Psest_3542 0.44 -1.5 3,723,899 + Psest_3542 0.44 +0.9 3,723,899 + Psest_3542 0.44 -0.5 3,723,899 + Psest_3542 0.44 +2.1 3,723,899 + Psest_3542 0.44 +0.4 3,723,899 + Psest_3542 0.44 +2.4 3,723,899 + Psest_3542 0.44 +4.2 3,723,899 + Psest_3542 0.44 -1.3 3,723,900 - Psest_3542 0.44 -1.4 3,723,900 - Psest_3542 0.44 -0.2 3,723,900 - Psest_3542 0.44 -2.6 3,723,900 - Psest_3542 0.44 +0.4 3,723,900 - Psest_3542 0.44 -0.8 3,723,900 - Psest_3542 0.44 -0.4 3,723,900 - Psest_3542 0.44 -1.3 3,723,900 - Psest_3542 0.44 -1.1 3,723,900 - Psest_3542 0.44 -1.0 3,723,900 - Psest_3542 0.44 -0.1 3,723,900 - Psest_3542 0.44 -1.2 3,723,900 - Psest_3542 0.44 +2.3 3,723,900 - Psest_3542 0.44 +0.6 3,723,900 - Psest_3542 0.44 +1.9 3,724,276 + +0.4 3,724,330 + -0.5 3,724,398 + Psest_3543 0.13 -1.2 3,724,399 - Psest_3543 0.13 -1.8 3,724,701 - Psest_3543 0.88 +2.5 3,724,701 - Psest_3543 0.88 -1.0 3,724,701 - Psest_3543 0.88 +0.5
Or see this region's nucleotide sequence