Experiment: Benzethonium chloride 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2124 and Psest_2125 are separated by 61 nucleotides Psest_2125 and Psest_2126 are separated by 58 nucleotides
Psest_2124: Psest_2124 - D-gluconate TRAP transporter, large permease component (from data) , at 2,255,256 to 2,256,533
_2124
Psest_2125: Psest_2125 - D-gluconate TRAP transporter, periplasmic component (from data) , at 2,256,595 to 2,257,611
_2125
Psest_2126: Psest_2126 - Transcriptional regulators, at 2,257,670 to 2,258,689
_2126
Position (kb)
2256
2257
2258 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2255.730 kb on + strand, within Psest_2124 at 2255.730 kb on + strand, within Psest_2124 at 2255.730 kb on + strand, within Psest_2124 at 2255.731 kb on - strand, within Psest_2124 at 2255.994 kb on + strand, within Psest_2124 at 2255.994 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.123 kb on + strand, within Psest_2124 at 2256.124 kb on - strand, within Psest_2124 at 2256.458 kb on + strand at 2256.458 kb on + strand at 2256.459 kb on - strand at 2256.462 kb on + strand at 2256.462 kb on + strand at 2256.462 kb on + strand at 2256.462 kb on + strand at 2256.462 kb on + strand at 2256.462 kb on + strand at 2256.463 kb on - strand at 2256.463 kb on - strand at 2256.463 kb on - strand at 2256.463 kb on - strand at 2256.798 kb on + strand, within Psest_2125 at 2256.798 kb on + strand, within Psest_2125 at 2256.799 kb on - strand, within Psest_2125 at 2256.799 kb on - strand, within Psest_2125 at 2256.799 kb on - strand, within Psest_2125 at 2257.270 kb on + strand, within Psest_2125 at 2257.271 kb on - strand, within Psest_2125 at 2257.285 kb on + strand, within Psest_2125 at 2257.285 kb on + strand, within Psest_2125 at 2257.285 kb on + strand, within Psest_2125 at 2257.309 kb on + strand, within Psest_2125 at 2257.705 kb on + strand at 2257.705 kb on + strand at 2257.705 kb on + strand at 2257.706 kb on - strand at 2257.994 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.108 kb on + strand, within Psest_2126 at 2258.109 kb on - strand, within Psest_2126 at 2258.159 kb on + strand, within Psest_2126 at 2258.160 kb on - strand, within Psest_2126 at 2258.160 kb on - strand, within Psest_2126 at 2258.319 kb on - strand, within Psest_2126 at 2258.488 kb on - strand, within Psest_2126 at 2258.488 kb on - strand, within Psest_2126
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.01 mM remove 2,255,730 + Psest_2124 0.37 -1.3 2,255,730 + Psest_2124 0.37 +2.0 2,255,730 + Psest_2124 0.37 +2.3 2,255,731 - Psest_2124 0.37 +0.9 2,255,994 + Psest_2124 0.58 -0.4 2,255,994 + Psest_2124 0.58 -2.8 2,256,123 + Psest_2124 0.68 +0.1 2,256,123 + Psest_2124 0.68 -0.3 2,256,123 + Psest_2124 0.68 -0.1 2,256,123 + Psest_2124 0.68 +0.2 2,256,123 + Psest_2124 0.68 +1.2 2,256,123 + Psest_2124 0.68 +0.3 2,256,124 - Psest_2124 0.68 -1.5 2,256,458 + -0.9 2,256,458 + -2.3 2,256,459 - -1.3 2,256,462 + -2.3 2,256,462 + -1.1 2,256,462 + -2.5 2,256,462 + -0.7 2,256,462 + +0.0 2,256,462 + -1.3 2,256,463 - -2.1 2,256,463 - -1.0 2,256,463 - -2.2 2,256,463 - +2.3 2,256,798 + Psest_2125 0.20 -0.3 2,256,798 + Psest_2125 0.20 -0.8 2,256,799 - Psest_2125 0.20 -0.3 2,256,799 - Psest_2125 0.20 -0.2 2,256,799 - Psest_2125 0.20 -1.1 2,257,270 + Psest_2125 0.66 +0.1 2,257,271 - Psest_2125 0.66 -0.4 2,257,285 + Psest_2125 0.68 -1.1 2,257,285 + Psest_2125 0.68 +0.4 2,257,285 + Psest_2125 0.68 -0.3 2,257,309 + Psest_2125 0.70 +0.0 2,257,705 + -2.0 2,257,705 + -1.3 2,257,705 + -0.8 2,257,706 - +2.1 2,257,994 + Psest_2126 0.32 -0.8 2,258,108 + Psest_2126 0.43 +0.4 2,258,108 + Psest_2126 0.43 -0.3 2,258,108 + Psest_2126 0.43 -2.2 2,258,108 + Psest_2126 0.43 -0.3 2,258,109 - Psest_2126 0.43 -1.7 2,258,159 + Psest_2126 0.48 +1.5 2,258,160 - Psest_2126 0.48 +0.8 2,258,160 - Psest_2126 0.48 +1.8 2,258,319 - Psest_2126 0.64 -0.6 2,258,488 - Psest_2126 0.80 -1.3 2,258,488 - Psest_2126 0.80 +1.0
Or see this region's nucleotide sequence