Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4297 and Psest_4298 are separated by 0 nucleotides Psest_4298 and Psest_4299 overlap by 8 nucleotides Psest_4299 and Psest_4300 are separated by 128 nucleotides
Psest_4297: Psest_4297 - PAS domain S-box, at 4,491,792 to 4,494,203
_4297
Psest_4298: Psest_4298 - Response regulator containing a CheY-like receiver domain and a GGDEF domain, at 4,494,204 to 4,494,590
_4298
Psest_4299: Psest_4299 - diguanylate cyclase (GGDEF) domain, at 4,494,583 to 4,496,220
_4299
Psest_4300: Psest_4300 - PAS domain S-box, at 4,496,349 to 4,499,219
_4300
Position (kb)
4494
4495
4496
4497 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4493.784 kb on + strand, within Psest_4297 at 4493.785 kb on - strand, within Psest_4297 at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.202 kb on - strand at 4494.202 kb on - strand at 4494.202 kb on - strand at 4494.202 kb on - strand at 4494.442 kb on + strand, within Psest_4298 at 4494.596 kb on + strand at 4494.597 kb on - strand at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4495.390 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.665 kb on + strand, within Psest_4299 at 4495.685 kb on + strand, within Psest_4299 at 4495.685 kb on + strand, within Psest_4299 at 4495.685 kb on + strand, within Psest_4299 at 4495.685 kb on + strand, within Psest_4299 at 4495.685 kb on + strand, within Psest_4299 at 4495.686 kb on - strand, within Psest_4299 at 4495.686 kb on - strand, within Psest_4299 at 4495.686 kb on - strand, within Psest_4299 at 4495.687 kb on + strand, within Psest_4299 at 4495.687 kb on + strand, within Psest_4299 at 4495.687 kb on + strand, within Psest_4299 at 4495.688 kb on - strand, within Psest_4299 at 4495.688 kb on - strand, within Psest_4299 at 4495.688 kb on - strand, within Psest_4299 at 4495.688 kb on - strand, within Psest_4299 at 4495.869 kb on + strand, within Psest_4299 at 4495.869 kb on + strand, within Psest_4299 at 4495.874 kb on - strand, within Psest_4299 at 4496.086 kb on + strand at 4496.086 kb on + strand at 4496.086 kb on + strand at 4496.087 kb on - strand at 4496.087 kb on - strand at 4496.087 kb on - strand at 4496.142 kb on - strand at 4496.142 kb on - strand at 4496.142 kb on - strand at 4496.170 kb on + strand at 4496.170 kb on + strand at 4496.170 kb on + strand at 4496.171 kb on - strand at 4496.171 kb on - strand at 4496.202 kb on - strand at 4496.202 kb on - strand at 4496.202 kb on - strand at 4496.219 kb on - strand at 4496.219 kb on - strand at 4496.266 kb on + strand at 4496.266 kb on + strand at 4496.266 kb on + strand at 4496.267 kb on - strand at 4496.267 kb on - strand at 4496.267 kb on - strand at 4496.268 kb on + strand at 4496.268 kb on + strand at 4496.268 kb on + strand at 4496.268 kb on + strand at 4496.269 kb on - strand at 4496.269 kb on - strand at 4496.269 kb on - strand at 4496.269 kb on - strand at 4496.269 kb on - strand at 4496.269 kb on - strand at 4496.324 kb on + strand at 4496.324 kb on + strand at 4496.324 kb on + strand at 4496.325 kb on - strand at 4496.325 kb on - strand at 4496.325 kb on - strand at 4496.325 kb on - strand at 4496.325 kb on - strand at 4496.577 kb on + strand at 4496.577 kb on + strand at 4496.577 kb on + strand at 4496.578 kb on - strand at 4496.589 kb on + strand at 4496.622 kb on - strand at 4496.658 kb on + strand, within Psest_4300 at 4496.966 kb on - strand, within Psest_4300 at 4496.972 kb on + strand, within Psest_4300 at 4497.057 kb on + strand, within Psest_4300 at 4497.058 kb on - strand, within Psest_4300
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 4,493,784 + Psest_4297 0.83 -1.2 4,493,785 - Psest_4297 0.83 +0.7 4,494,201 + +0.4 4,494,201 + -1.8 4,494,201 + -0.6 4,494,201 + +0.4 4,494,201 + +0.1 4,494,202 - -0.9 4,494,202 - -0.9 4,494,202 - +1.5 4,494,202 - -1.0 4,494,442 + Psest_4298 0.61 -2.0 4,494,596 + +0.7 4,494,597 - +0.6 4,494,988 + Psest_4299 0.25 +0.4 4,494,988 + Psest_4299 0.25 +0.1 4,494,988 + Psest_4299 0.25 -0.4 4,494,988 + Psest_4299 0.25 +0.2 4,494,988 + Psest_4299 0.25 -1.0 4,494,988 + Psest_4299 0.25 -0.4 4,494,989 - Psest_4299 0.25 +0.5 4,494,989 - Psest_4299 0.25 +1.7 4,494,989 - Psest_4299 0.25 -2.0 4,494,989 - Psest_4299 0.25 +0.0 4,494,989 - Psest_4299 0.25 -0.1 4,494,989 - Psest_4299 0.25 +0.2 4,494,989 - Psest_4299 0.25 +0.0 4,494,989 - Psest_4299 0.25 -0.8 4,495,390 + Psest_4299 0.49 +0.2 4,495,579 + Psest_4299 0.61 -0.5 4,495,579 + Psest_4299 0.61 -0.4 4,495,579 + Psest_4299 0.61 -0.4 4,495,579 + Psest_4299 0.61 -0.0 4,495,579 + Psest_4299 0.61 +0.5 4,495,580 - Psest_4299 0.61 +0.1 4,495,580 - Psest_4299 0.61 -0.0 4,495,580 - Psest_4299 0.61 -1.2 4,495,580 - Psest_4299 0.61 -0.4 4,495,580 - Psest_4299 0.61 +1.0 4,495,665 + Psest_4299 0.66 +1.5 4,495,685 + Psest_4299 0.67 +0.5 4,495,685 + Psest_4299 0.67 +1.0 4,495,685 + Psest_4299 0.67 -1.3 4,495,685 + Psest_4299 0.67 +0.0 4,495,685 + Psest_4299 0.67 -0.1 4,495,686 - Psest_4299 0.67 -2.9 4,495,686 - Psest_4299 0.67 -0.3 4,495,686 - Psest_4299 0.67 -1.5 4,495,687 + Psest_4299 0.67 -0.0 4,495,687 + Psest_4299 0.67 -0.4 4,495,687 + Psest_4299 0.67 -0.1 4,495,688 - Psest_4299 0.67 -0.9 4,495,688 - Psest_4299 0.67 +0.1 4,495,688 - Psest_4299 0.67 +0.4 4,495,688 - Psest_4299 0.67 -1.3 4,495,869 + Psest_4299 0.79 -0.6 4,495,869 + Psest_4299 0.79 +0.2 4,495,874 - Psest_4299 0.79 -0.8 4,496,086 + +0.1 4,496,086 + +1.2 4,496,086 + -0.5 4,496,087 - -0.6 4,496,087 - -0.4 4,496,087 - +2.6 4,496,142 - +0.2 4,496,142 - -1.7 4,496,142 - -0.9 4,496,170 + +0.3 4,496,170 + +0.8 4,496,170 + +0.7 4,496,171 - +1.0 4,496,171 - -2.1 4,496,202 - +0.5 4,496,202 - +0.7 4,496,202 - +0.6 4,496,219 - +1.0 4,496,219 - -0.7 4,496,266 + +0.7 4,496,266 + +0.2 4,496,266 + -0.3 4,496,267 - -1.5 4,496,267 - -2.2 4,496,267 - -1.6 4,496,268 + +0.7 4,496,268 + -0.2 4,496,268 + -0.4 4,496,268 + +1.2 4,496,269 - +0.2 4,496,269 - -0.5 4,496,269 - +0.4 4,496,269 - -0.5 4,496,269 - +0.9 4,496,269 - -0.0 4,496,324 + +1.8 4,496,324 + -0.8 4,496,324 + +0.5 4,496,325 - +0.4 4,496,325 - -0.1 4,496,325 - +1.5 4,496,325 - -1.1 4,496,325 - -0.9 4,496,577 + +0.0 4,496,577 + -2.1 4,496,577 + -0.0 4,496,578 - -0.7 4,496,589 + -1.6 4,496,622 - -2.9 4,496,658 + Psest_4300 0.11 -2.4 4,496,966 - Psest_4300 0.21 +0.1 4,496,972 + Psest_4300 0.22 -1.4 4,497,057 + Psest_4300 0.25 -0.2 4,497,058 - Psest_4300 0.25 +0.5
Or see this region's nucleotide sequence