Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4139

Experiment: nitrite (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite (N)
4,319,106	-		Psest_4137	0.30	+0.2
4,319,160	+		Psest_4137	0.35	-2.0
4,319,160	+		Psest_4137	0.35	+0.5
4,319,182	-		Psest_4137	0.37	-0.7
4,319,405	+		Psest_4137	0.57	+0.0
4,319,405	+		Psest_4137	0.57	-2.7
4,319,405	+		Psest_4137	0.57	+1.7
4,319,406	-		Psest_4137	0.57	+1.0
4,319,480	-		Psest_4137	0.63	+1.4
4,319,480	-		Psest_4137	0.63	-0.4
4,319,730	+		Psest_4137	0.86	-0.5
4,319,730	+		Psest_4137	0.86	+1.0
4,319,731	-		Psest_4137	0.86	+0.2
4,319,850	+				+2.4
4,319,850	+				-0.2
4,319,851	-				-1.1
4,319,851	-				+0.2
4,320,149	+				+0.2
4,320,310	+				+0.6
4,320,476	-		Psest_4139	0.14	+2.1
4,320,716	-		Psest_4139	0.23	+1.5
4,320,831	+		Psest_4139	0.27	-0.2
4,320,831	+		Psest_4139	0.27	+0.6
4,320,831	+		Psest_4139	0.27	+0.1
4,320,831	+		Psest_4139	0.27	+1.7
4,320,831	+		Psest_4139	0.27	+0.8
4,320,831	+				+2.6
4,320,832	-		Psest_4139	0.27	-0.1
4,320,832	-		Psest_4139	0.27	+1.2
4,320,832	-		Psest_4139	0.27	-0.0
4,320,832	-		Psest_4139	0.27	+0.7
4,320,860	-		Psest_4139	0.28	+0.3
4,320,895	+		Psest_4139	0.30	-0.2
4,320,896	-		Psest_4139	0.30	+0.6
4,320,906	-		Psest_4139	0.30	-0.9
4,321,060	+		Psest_4139	0.35	+0.1
4,321,060	+		Psest_4139	0.35	+0.6
4,321,060	+		Psest_4139	0.35	+0.4
4,321,060	+		Psest_4139	0.35	+0.3
4,321,060	+		Psest_4139	0.35	+0.5
4,321,060	+		Psest_4139	0.35	-0.9
4,321,060	+		Psest_4139	0.35	+0.1
4,321,060	+		Psest_4139	0.35	-0.4
4,321,060	+		Psest_4139	0.35	+1.5
4,321,060	+		Psest_4139	0.35	+0.9
4,321,060	+		Psest_4139	0.35	-0.5
4,321,060	+		Psest_4139	0.35	+1.8
4,321,060	+		Psest_4139	0.35	-2.0
4,321,060	+		Psest_4139	0.35	+0.7
4,321,060	+		Psest_4139	0.35	+0.8
4,321,060	+		Psest_4139	0.35	+0.7
4,321,061	-		Psest_4139	0.35	+1.0
4,321,061	-		Psest_4139	0.35	+0.6
4,321,061	-		Psest_4139	0.35	-0.4
4,321,061	-		Psest_4139	0.35	-1.5
4,321,061	-		Psest_4139	0.35	+1.8
4,321,061	-		Psest_4139	0.35	-0.7
4,321,061	-		Psest_4139	0.35	+0.4
4,321,061	-		Psest_4139	0.35	+1.2
4,321,061	-		Psest_4139	0.35	+1.0
4,321,097	-		Psest_4139	0.37	+1.5
4,321,097	-		Psest_4139	0.37	-0.0
4,321,097	-		Psest_4139	0.37	+0.4
4,321,555	+		Psest_4139	0.53	-0.1
4,321,556	-		Psest_4139	0.53	+0.7
4,321,556	-		Psest_4139	0.53	+0.1
4,321,714	-		Psest_4139	0.59	-0.4
4,321,799	+		Psest_4139	0.62	+1.6
4,321,799	+		Psest_4139	0.62	+3.2
4,321,800	-		Psest_4139	0.62	-0.9
4,321,800	-		Psest_4139	0.62	+0.2
4,321,800	-		Psest_4139	0.62	+0.0
4,321,801	+		Psest_4139	0.62	+1.7
4,321,801	+		Psest_4139	0.62	+0.3
4,321,801	+		Psest_4139	0.62	+0.9
4,321,801	+		Psest_4139	0.62	+0.2
4,321,801	+		Psest_4139	0.62	+0.7
4,321,802	-		Psest_4139	0.62	+0.9
4,321,802	-		Psest_4139	0.62	-0.6
4,321,802	-		Psest_4139	0.62	+0.4
4,321,819	+		Psest_4139	0.63	+1.5
4,321,819	+		Psest_4139	0.63	+0.5
4,321,819	+		Psest_4139	0.63	-0.4
4,321,819	+		Psest_4139	0.63	+0.7
4,321,820	-		Psest_4139	0.63	+2.0
4,321,820	-		Psest_4139	0.63	-0.1
4,321,820	-		Psest_4139	0.63	-0.1
4,321,820	-		Psest_4139	0.63	+0.9
4,321,820	-		Psest_4139	0.63	+0.7
4,321,820	-		Psest_4139	0.63	+1.1
4,321,869	+		Psest_4139	0.64	+1.4
4,321,870	-		Psest_4139	0.65	-0.7
4,321,870	-		Psest_4139	0.65	+0.7
4,322,076	+		Psest_4139	0.72	+1.2
4,322,076	+		Psest_4139	0.72	-0.1
4,322,077	-		Psest_4139	0.72	+1.4
4,322,166	+		Psest_4139	0.75	+2.1
4,322,166	+		Psest_4139	0.75	-0.7
4,322,167	-		Psest_4139	0.75	+0.5
4,322,323	+		Psest_4139	0.81	-0.4
4,322,324	-		Psest_4139	0.81	-2.3
4,322,324	-		Psest_4139	0.81	-0.1
4,322,324	-		Psest_4139	0.81	-0.4
4,322,392	+		Psest_4139	0.83	+1.0
4,322,393	-		Psest_4139	0.83	+0.2
4,322,393	-		Psest_4139	0.83	+1.3
4,322,393	-		Psest_4139	0.83	+0.8
4,322,393	-		Psest_4139	0.83	+0.0
4,322,554	+		Psest_4139	0.89	-0.2
4,322,652	-				-0.1
4,322,786	+				+0.1
4,322,786	+				+0.6
4,322,787	-				+1.7
4,322,787	-				-0.3
4,322,787	-				+0.6
4,322,787	-				-0.1
4,322,858	+				+1.1
4,322,858	+				+1.4
4,322,858	+				+1.6
4,322,859	-				-1.0
4,322,859	-				+1.7
4,323,267	+		Psest_4140	0.36	+1.1
4,323,267	+		Psest_4140	0.36	+1.1
4,323,267	+		Psest_4140	0.36	+0.5
4,323,267	+		Psest_4140	0.36	-0.8
4,323,268	-		Psest_4140	0.36	+0.6
4,323,268	-		Psest_4140	0.36	+0.4
4,323,268	-		Psest_4140	0.36	-0.9
4,323,318	+		Psest_4140	0.40	+0.3
4,323,318	+		Psest_4140	0.40	+0.8
4,323,318	+		Psest_4140	0.40	+1.2
4,323,318	+		Psest_4140	0.40	+0.1
4,323,318	+		Psest_4140	0.40	-0.5
4,323,318	+		Psest_4140	0.40	+0.4
4,323,318	+		Psest_4140	0.40	-0.7
4,323,318	+		Psest_4140	0.40	+0.1
4,323,318	+		Psest_4140	0.40	-0.2
4,323,318	+		Psest_4140	0.40	+1.5
4,323,318	+		Psest_4140	0.40	-1.5
4,323,319	-		Psest_4140	0.40	+1.3
4,323,319	-		Psest_4140	0.40	+0.2
4,323,319	-		Psest_4140	0.40	+0.8
4,323,319	-		Psest_4140	0.40	+3.3
4,323,319	-		Psest_4140	0.40	+0.6
4,323,519	+		Psest_4140	0.57	-0.9
4,323,519	+		Psest_4140	0.57	+2.9
4,323,520	-		Psest_4140	0.57	+0.4
4,323,520	-		Psest_4140	0.57	+1.1
4,323,520	-		Psest_4140	0.57	+0.4
4,323,520	-		Psest_4140	0.57	+0.7
4,323,612	+		Psest_4140	0.65	+0.4
4,323,612	+		Psest_4140	0.65	-0.2
4,323,613	-		Psest_4140	0.65	+0.9
4,323,613	-		Psest_4140	0.65	-1.0
4,323,658	+		Psest_4140	0.69	-0.4
4,323,659	-		Psest_4140	0.69	+0.0
4,323,687	+		Psest_4140	0.72	+2.6
4,323,687	+		Psest_4140	0.72	+0.9
4,323,687	+		Psest_4140	0.72	-0.1
4,323,687	+		Psest_4140	0.72	-0.1
4,323,687	+		Psest_4140	0.72	+1.1
4,323,688	-		Psest_4140	0.72	+0.6
4,323,688	-		Psest_4140	0.72	+1.2
4,323,688	-		Psest_4140	0.72	+0.5
4,323,688	-				+0.0