Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3771

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,936,437	+				-0.1
3,936,452	-				-0.4
3,936,744	+				+0.3
3,936,744	+				+0.9
3,936,744	+				+1.4
3,936,744	+				+1.0
3,936,744	+				-0.8
3,936,745	-				-1.3
3,936,745	-				-0.6
3,936,745	-				+0.2
3,936,793	-				+0.2
3,936,793	-				-0.2
3,936,793	-				-0.1
3,936,793	-				-0.7
3,936,793	-				+0.3
3,936,793	-				-0.9
3,936,793	-				+0.7
3,936,798	-				+0.5
3,936,798	-				-0.3
3,936,798	-				-0.2
3,936,799	+				-1.1
3,936,870	+				+0.7
3,936,871	-				-0.5
3,936,910	+		Psest_3770	0.16	+0.7
3,936,911	-		Psest_3770	0.17	+0.5
3,936,911	-		Psest_3770	0.17	-0.1
3,936,911	-		Psest_3770	0.17	-0.2
3,936,911	-		Psest_3770	0.17	-1.9
3,936,911	-		Psest_3770	0.17	-0.8
3,936,911	-		Psest_3770	0.17	-1.6
3,936,911	-		Psest_3770	0.17	-1.2
3,937,021	+		Psest_3770	0.42	-0.2
3,937,021	+		Psest_3770	0.42	-0.0
3,937,021	+		Psest_3770	0.42	-1.3
3,937,022	-		Psest_3770	0.43	-1.7
3,937,033	+		Psest_3770	0.45	+0.8
3,937,033	+		Psest_3770	0.45	-0.6
3,937,034	-		Psest_3770	0.46	+0.8
3,937,133	+		Psest_3770	0.69	+0.1
3,937,134	-		Psest_3770	0.69	+0.6
3,937,134	-		Psest_3770	0.69	-0.5
3,937,134	-		Psest_3770	0.69	+1.6
3,937,152	+		Psest_3770	0.73	-1.1
3,937,153	-		Psest_3770	0.73	+0.3
3,937,306	+				-0.7
3,937,306	+				-0.1
3,937,306	+				+0.8
3,937,307	-				-3.8
3,937,307	-				+1.0
3,937,356	+				-0.7
3,937,356	+				+0.1
3,937,356	+				-0.3
3,937,356	+				-1.3
3,937,357	-				-0.2
3,937,357	-				-0.1
3,937,430	+				-2.2
3,937,430	+				-1.3
3,937,430	+				-1.2
3,937,430	+				-1.7
3,937,431	-				-0.2
3,937,431	-				-0.8
3,937,505	-		Psest_3771	0.11	-2.6
3,937,505	-		Psest_3771	0.11	-0.9
3,937,505	-		Psest_3771	0.11	-1.2
3,937,593	+		Psest_3771	0.18	-2.3
3,937,594	-		Psest_3771	0.18	-2.0
3,938,021	+		Psest_3771	0.52	-1.8
3,938,022	-		Psest_3771	0.52	-3.8
3,938,022	-		Psest_3771	0.52	-0.3
3,938,022	-		Psest_3771	0.52	-0.7
3,938,022	-		Psest_3771	0.52	-1.6
3,938,169	-		Psest_3771	0.64	-0.2
3,938,303	+		Psest_3771	0.75	-0.8
3,938,304	-		Psest_3771	0.75	-2.6
3,938,304	-		Psest_3771	0.75	-1.7
3,938,306	+		Psest_3771	0.75	-3.3
3,938,306	+		Psest_3771	0.75	-1.9
3,938,306	+		Psest_3771	0.75	-2.2
3,938,306	+		Psest_3771	0.75	-3.2
3,938,307	-		Psest_3771	0.75	-2.0
3,938,307	-		Psest_3771	0.75	-2.4
3,938,307	-		Psest_3771	0.75	-2.5
3,938,307	-		Psest_3771	0.75	-2.6
3,938,307	-		Psest_3771	0.75	-2.5
3,938,307	-		Psest_3771	0.75	-0.9
3,938,307	-		Psest_3771	0.75	-2.8
3,938,405	+		Psest_3771	0.83	-2.3
3,938,405	+		Psest_3771	0.83	-0.5
3,938,405	+		Psest_3771	0.83	-3.3
3,938,405	+		Psest_3771	0.83	-2.6
3,938,405	+		Psest_3771	0.83	-2.1
3,938,405	+		Psest_3771	0.83	-3.3
3,938,405	+		Psest_3771	0.83	-2.8
3,938,405	+		Psest_3771	0.83	-3.0
3,938,406	-		Psest_3771	0.83	-2.2
3,938,406	-		Psest_3771	0.83	-1.7
3,938,414	+		Psest_3771	0.84	-2.5
3,938,414	+		Psest_3771	0.84	-1.6
3,938,414	+		Psest_3771	0.84	-2.5
3,938,414	+		Psest_3771	0.84	-1.7
3,938,414	+		Psest_3771	0.84	-4.9
3,938,414	+		Psest_3771	0.84	-2.0
3,938,414	+		Psest_3771	0.84	-1.9
3,938,414	+		Psest_3771	0.84	-0.3
3,938,414	+		Psest_3771	0.84	-2.9
3,938,414	+		Psest_3771	0.84	-3.6
3,938,414	+		Psest_3771	0.84	-1.8
3,938,414	+		Psest_3771	0.84	-2.8
3,938,414	+		Psest_3771	0.84	-5.1
3,938,414	+		Psest_3771	0.84	-2.8
3,938,414	+		Psest_3771	0.84	-2.8
3,938,414	+		Psest_3771	0.84	-1.4
3,938,414	+		Psest_3771	0.84	-2.0
3,938,414	+		Psest_3771	0.84	-3.0
3,938,414	+		Psest_3771	0.84	-1.6
3,938,414	+		Psest_3771	0.84	-2.7
3,938,415	-		Psest_3771	0.84	-0.9
3,938,415	-		Psest_3771	0.84	-3.3
3,938,415	-		Psest_3771	0.84	-1.3
3,938,415	-		Psest_3771	0.84	-2.2
3,938,415	-		Psest_3771	0.84	-1.3
3,938,415	-		Psest_3771	0.84	-3.2
3,938,415	-		Psest_3771	0.84	-1.9
3,938,415	-		Psest_3771	0.84	-2.2
3,938,415	-		Psest_3771	0.84	-0.8
3,938,415	-		Psest_3771	0.84	-1.7
3,938,415	-		Psest_3771	0.84	-1.1
3,938,415	-		Psest_3771	0.84	-0.6
3,938,415	-		Psest_3771	0.84	-1.9
3,938,415	-		Psest_3771	0.84	-2.5
3,938,415	-		Psest_3771	0.84	-1.6
3,938,415	-		Psest_3771	0.84	-2.1
3,938,415	-		Psest_3771	0.84	-2.3
3,938,415	-		Psest_3771	0.84	-1.9
3,938,415	-		Psest_3771	0.84	-2.6
3,938,415	-		Psest_3771	0.84	-1.8
3,938,415	-		Psest_3771	0.84	-1.7
3,938,415	-		Psest_3771	0.84	-0.6
3,938,415	-		Psest_3771	0.84	-3.9
3,938,415	-		Psest_3771	0.84	-1.0
3,938,415	-		Psest_3771	0.84	-2.2
3,938,415	-		Psest_3771	0.84	-1.2
3,938,415	-		Psest_3771	0.84	-2.2
3,938,415	-		Psest_3771	0.84	-2.5
3,938,415	-		Psest_3771	0.84	-1.2
3,938,415	-		Psest_3771	0.84	-3.0
3,938,415	-		Psest_3771	0.84	-2.8
3,938,415	-		Psest_3771	0.84	-2.3
3,938,417	+		Psest_3771	0.84	-2.0
3,938,432	+		Psest_3771	0.85	-2.4
3,938,432	+		Psest_3771	0.85	-2.8
3,938,432	+		Psest_3771	0.85	-2.2
3,938,432	+		Psest_3771	0.85	-2.7
3,938,432	+		Psest_3771	0.85	-2.1
3,938,432	+		Psest_3771	0.85	-1.8
3,938,432	+		Psest_3771	0.85	-1.3
3,938,432	+		Psest_3771	0.85	-0.6
3,938,432	+		Psest_3771	0.85	-2.3
3,938,432	+		Psest_3771	0.85	-2.7
3,938,432	+		Psest_3771	0.85	-1.8
3,938,433	-		Psest_3771	0.85	-1.3
3,938,433	-		Psest_3771	0.85	-2.5
3,938,433	-		Psest_3771	0.85	-3.0
3,938,433	-		Psest_3771	0.85	-1.9
3,938,433	-		Psest_3771	0.85	-1.9
3,938,433	-		Psest_3771	0.85	-1.8
3,938,433	-		Psest_3771	0.85	-0.9
3,938,433	-		Psest_3771	0.85	-3.2
3,938,433	-		Psest_3771	0.85	-2.2
3,938,433	-		Psest_3771	0.85	-1.2
3,938,433	-		Psest_3771	0.85	-1.2
3,938,433	-		Psest_3771	0.85	-3.3
3,938,433	-		Psest_3771	0.85	-2.5
3,938,453	+		Psest_3771	0.87	-3.6
3,938,453	+		Psest_3771	0.87	-2.8
3,938,570	+				-1.0
3,938,570	+				-2.9
3,938,570	+				-1.9
3,938,570	+				-1.8
3,938,570	+				-2.2
3,938,570	+				-1.7
3,938,570	+				-1.7
3,938,570	+				-2.3
3,938,570	+				-3.0
3,938,571	-				-1.7
3,938,571	-				-0.2
3,938,571	-				-1.5
3,938,571	-				-2.3
3,938,571	-				-1.6
3,938,614	-				-2.3
3,938,844	+				-3.0
3,938,844	+				-3.3
3,938,844	+				-2.6
3,938,844	+				-2.8
3,938,844	+				-3.5
3,938,844	+				-1.0
3,938,844	+				+0.4
3,938,844	+				-2.7
3,938,845	-				+0.1
3,938,862	+				-2.1
3,938,863	-				+0.8
3,938,863	-				+0.9
3,938,863	-				+0.8
3,939,275	-		Psest_3772	0.41	-0.0
3,939,537	+		Psest_3772	0.61	-1.6
3,939,537	+		Psest_3772	0.61	-1.8
3,939,537	+		Psest_3772	0.61	-2.0
3,939,537	+		Psest_3772	0.61	+0.6
3,939,538	-		Psest_3772	0.61	+0.0
3,939,538	-		Psest_3772	0.61	-1.4
3,939,538	-		Psest_3772	0.61	-0.2