Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3769 and Psest_3770 are separated by 78 nucleotides Psest_3770 and Psest_3771 are separated by 103 nucleotides Psest_3771 and Psest_3772 are separated by 115 nucleotides
Psest_3769: Psest_3769 - hypothetical protein, at 3,936,432 to 3,936,761
_3769
Psest_3770: Psest_3770 - secondary thiamine-phosphate synthase enzyme, at 3,936,840 to 3,937,265
_3770
Psest_3771: Psest_3771 - probable ammonium transporter, marine subtype, at 3,937,369 to 3,938,619
_3771
Psest_3772: Psest_3772 - ammonium transporter, at 3,938,735 to 3,940,051
_3772
Position (kb)
3937
3938
3939 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3936.437 kb on + strand at 3936.452 kb on - strand at 3936.744 kb on + strand at 3936.744 kb on + strand at 3936.744 kb on + strand at 3936.744 kb on + strand at 3936.744 kb on + strand at 3936.745 kb on - strand at 3936.745 kb on - strand at 3936.745 kb on - strand at 3936.793 kb on - strand at 3936.793 kb on - strand at 3936.793 kb on - strand at 3936.793 kb on - strand at 3936.793 kb on - strand at 3936.793 kb on - strand at 3936.793 kb on - strand at 3936.798 kb on - strand at 3936.798 kb on - strand at 3936.798 kb on - strand at 3936.799 kb on + strand at 3936.870 kb on + strand at 3936.871 kb on - strand at 3936.910 kb on + strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3936.911 kb on - strand, within Psest_3770 at 3937.021 kb on + strand, within Psest_3770 at 3937.021 kb on + strand, within Psest_3770 at 3937.021 kb on + strand, within Psest_3770 at 3937.022 kb on - strand, within Psest_3770 at 3937.033 kb on + strand, within Psest_3770 at 3937.033 kb on + strand, within Psest_3770 at 3937.034 kb on - strand, within Psest_3770 at 3937.133 kb on + strand, within Psest_3770 at 3937.134 kb on - strand, within Psest_3770 at 3937.134 kb on - strand, within Psest_3770 at 3937.134 kb on - strand, within Psest_3770 at 3937.152 kb on + strand, within Psest_3770 at 3937.153 kb on - strand, within Psest_3770 at 3937.306 kb on + strand at 3937.306 kb on + strand at 3937.306 kb on + strand at 3937.307 kb on - strand at 3937.307 kb on - strand at 3937.356 kb on + strand at 3937.356 kb on + strand at 3937.356 kb on + strand at 3937.356 kb on + strand at 3937.357 kb on - strand at 3937.357 kb on - strand at 3937.430 kb on + strand at 3937.430 kb on + strand at 3937.430 kb on + strand at 3937.430 kb on + strand at 3937.431 kb on - strand at 3937.431 kb on - strand at 3937.505 kb on - strand, within Psest_3771 at 3937.505 kb on - strand, within Psest_3771 at 3937.505 kb on - strand, within Psest_3771 at 3937.593 kb on + strand, within Psest_3771 at 3937.594 kb on - strand, within Psest_3771 at 3938.021 kb on + strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.169 kb on - strand, within Psest_3771 at 3938.303 kb on + strand, within Psest_3771 at 3938.304 kb on - strand, within Psest_3771 at 3938.304 kb on - strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.406 kb on - strand, within Psest_3771 at 3938.406 kb on - strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.417 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.453 kb on + strand, within Psest_3771 at 3938.453 kb on + strand, within Psest_3771 at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.614 kb on - strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.845 kb on - strand at 3938.862 kb on + strand at 3938.863 kb on - strand at 3938.863 kb on - strand at 3938.863 kb on - strand at 3939.275 kb on - strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.538 kb on - strand, within Psest_3772 at 3939.538 kb on - strand, within Psest_3772 at 3939.538 kb on - strand, within Psest_3772
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 3,936,437 + -0.1 3,936,452 - -0.4 3,936,744 + +0.3 3,936,744 + +0.9 3,936,744 + +1.4 3,936,744 + +1.0 3,936,744 + -0.8 3,936,745 - -1.3 3,936,745 - -0.6 3,936,745 - +0.2 3,936,793 - +0.2 3,936,793 - -0.2 3,936,793 - -0.1 3,936,793 - -0.7 3,936,793 - +0.3 3,936,793 - -0.9 3,936,793 - +0.7 3,936,798 - +0.5 3,936,798 - -0.3 3,936,798 - -0.2 3,936,799 + -1.1 3,936,870 + +0.7 3,936,871 - -0.5 3,936,910 + Psest_3770 0.16 +0.7 3,936,911 - Psest_3770 0.17 +0.5 3,936,911 - Psest_3770 0.17 -0.1 3,936,911 - Psest_3770 0.17 -0.2 3,936,911 - Psest_3770 0.17 -1.9 3,936,911 - Psest_3770 0.17 -0.8 3,936,911 - Psest_3770 0.17 -1.6 3,936,911 - Psest_3770 0.17 -1.2 3,937,021 + Psest_3770 0.42 -0.2 3,937,021 + Psest_3770 0.42 -0.0 3,937,021 + Psest_3770 0.42 -1.3 3,937,022 - Psest_3770 0.43 -1.7 3,937,033 + Psest_3770 0.45 +0.8 3,937,033 + Psest_3770 0.45 -0.6 3,937,034 - Psest_3770 0.46 +0.8 3,937,133 + Psest_3770 0.69 +0.1 3,937,134 - Psest_3770 0.69 +0.6 3,937,134 - Psest_3770 0.69 -0.5 3,937,134 - Psest_3770 0.69 +1.6 3,937,152 + Psest_3770 0.73 -1.1 3,937,153 - Psest_3770 0.73 +0.3 3,937,306 + -0.7 3,937,306 + -0.1 3,937,306 + +0.8 3,937,307 - -3.8 3,937,307 - +1.0 3,937,356 + -0.7 3,937,356 + +0.1 3,937,356 + -0.3 3,937,356 + -1.3 3,937,357 - -0.2 3,937,357 - -0.1 3,937,430 + -2.2 3,937,430 + -1.3 3,937,430 + -1.2 3,937,430 + -1.7 3,937,431 - -0.2 3,937,431 - -0.8 3,937,505 - Psest_3771 0.11 -2.6 3,937,505 - Psest_3771 0.11 -0.9 3,937,505 - Psest_3771 0.11 -1.2 3,937,593 + Psest_3771 0.18 -2.3 3,937,594 - Psest_3771 0.18 -2.0 3,938,021 + Psest_3771 0.52 -1.8 3,938,022 - Psest_3771 0.52 -3.8 3,938,022 - Psest_3771 0.52 -0.3 3,938,022 - Psest_3771 0.52 -0.7 3,938,022 - Psest_3771 0.52 -1.6 3,938,169 - Psest_3771 0.64 -0.2 3,938,303 + Psest_3771 0.75 -0.8 3,938,304 - Psest_3771 0.75 -2.6 3,938,304 - Psest_3771 0.75 -1.7 3,938,306 + Psest_3771 0.75 -3.3 3,938,306 + Psest_3771 0.75 -1.9 3,938,306 + Psest_3771 0.75 -2.2 3,938,306 + Psest_3771 0.75 -3.2 3,938,307 - Psest_3771 0.75 -2.0 3,938,307 - Psest_3771 0.75 -2.4 3,938,307 - Psest_3771 0.75 -2.5 3,938,307 - Psest_3771 0.75 -2.6 3,938,307 - Psest_3771 0.75 -2.5 3,938,307 - Psest_3771 0.75 -0.9 3,938,307 - Psest_3771 0.75 -2.8 3,938,405 + Psest_3771 0.83 -2.3 3,938,405 + Psest_3771 0.83 -0.5 3,938,405 + Psest_3771 0.83 -3.3 3,938,405 + Psest_3771 0.83 -2.6 3,938,405 + Psest_3771 0.83 -2.1 3,938,405 + Psest_3771 0.83 -3.3 3,938,405 + Psest_3771 0.83 -2.8 3,938,405 + Psest_3771 0.83 -3.0 3,938,406 - Psest_3771 0.83 -2.2 3,938,406 - Psest_3771 0.83 -1.7 3,938,414 + Psest_3771 0.84 -2.5 3,938,414 + Psest_3771 0.84 -1.6 3,938,414 + Psest_3771 0.84 -2.5 3,938,414 + Psest_3771 0.84 -1.7 3,938,414 + Psest_3771 0.84 -4.9 3,938,414 + Psest_3771 0.84 -2.0 3,938,414 + Psest_3771 0.84 -1.9 3,938,414 + Psest_3771 0.84 -0.3 3,938,414 + Psest_3771 0.84 -2.9 3,938,414 + Psest_3771 0.84 -3.6 3,938,414 + Psest_3771 0.84 -1.8 3,938,414 + Psest_3771 0.84 -2.8 3,938,414 + Psest_3771 0.84 -5.1 3,938,414 + Psest_3771 0.84 -2.8 3,938,414 + Psest_3771 0.84 -2.8 3,938,414 + Psest_3771 0.84 -1.4 3,938,414 + Psest_3771 0.84 -2.0 3,938,414 + Psest_3771 0.84 -3.0 3,938,414 + Psest_3771 0.84 -1.6 3,938,414 + Psest_3771 0.84 -2.7 3,938,415 - Psest_3771 0.84 -0.9 3,938,415 - Psest_3771 0.84 -3.3 3,938,415 - Psest_3771 0.84 -1.3 3,938,415 - Psest_3771 0.84 -2.2 3,938,415 - Psest_3771 0.84 -1.3 3,938,415 - Psest_3771 0.84 -3.2 3,938,415 - Psest_3771 0.84 -1.9 3,938,415 - Psest_3771 0.84 -2.2 3,938,415 - Psest_3771 0.84 -0.8 3,938,415 - Psest_3771 0.84 -1.7 3,938,415 - Psest_3771 0.84 -1.1 3,938,415 - Psest_3771 0.84 -0.6 3,938,415 - Psest_3771 0.84 -1.9 3,938,415 - Psest_3771 0.84 -2.5 3,938,415 - Psest_3771 0.84 -1.6 3,938,415 - Psest_3771 0.84 -2.1 3,938,415 - Psest_3771 0.84 -2.3 3,938,415 - Psest_3771 0.84 -1.9 3,938,415 - Psest_3771 0.84 -2.6 3,938,415 - Psest_3771 0.84 -1.8 3,938,415 - Psest_3771 0.84 -1.7 3,938,415 - Psest_3771 0.84 -0.6 3,938,415 - Psest_3771 0.84 -3.9 3,938,415 - Psest_3771 0.84 -1.0 3,938,415 - Psest_3771 0.84 -2.2 3,938,415 - Psest_3771 0.84 -1.2 3,938,415 - Psest_3771 0.84 -2.2 3,938,415 - Psest_3771 0.84 -2.5 3,938,415 - Psest_3771 0.84 -1.2 3,938,415 - Psest_3771 0.84 -3.0 3,938,415 - Psest_3771 0.84 -2.8 3,938,415 - Psest_3771 0.84 -2.3 3,938,417 + Psest_3771 0.84 -2.0 3,938,432 + Psest_3771 0.85 -2.4 3,938,432 + Psest_3771 0.85 -2.8 3,938,432 + Psest_3771 0.85 -2.2 3,938,432 + Psest_3771 0.85 -2.7 3,938,432 + Psest_3771 0.85 -2.1 3,938,432 + Psest_3771 0.85 -1.8 3,938,432 + Psest_3771 0.85 -1.3 3,938,432 + Psest_3771 0.85 -0.6 3,938,432 + Psest_3771 0.85 -2.3 3,938,432 + Psest_3771 0.85 -2.7 3,938,432 + Psest_3771 0.85 -1.8 3,938,433 - Psest_3771 0.85 -1.3 3,938,433 - Psest_3771 0.85 -2.5 3,938,433 - Psest_3771 0.85 -3.0 3,938,433 - Psest_3771 0.85 -1.9 3,938,433 - Psest_3771 0.85 -1.9 3,938,433 - Psest_3771 0.85 -1.8 3,938,433 - Psest_3771 0.85 -0.9 3,938,433 - Psest_3771 0.85 -3.2 3,938,433 - Psest_3771 0.85 -2.2 3,938,433 - Psest_3771 0.85 -1.2 3,938,433 - Psest_3771 0.85 -1.2 3,938,433 - Psest_3771 0.85 -3.3 3,938,433 - Psest_3771 0.85 -2.5 3,938,453 + Psest_3771 0.87 -3.6 3,938,453 + Psest_3771 0.87 -2.8 3,938,570 + -1.0 3,938,570 + -2.9 3,938,570 + -1.9 3,938,570 + -1.8 3,938,570 + -2.2 3,938,570 + -1.7 3,938,570 + -1.7 3,938,570 + -2.3 3,938,570 + -3.0 3,938,571 - -1.7 3,938,571 - -0.2 3,938,571 - -1.5 3,938,571 - -2.3 3,938,571 - -1.6 3,938,614 - -2.3 3,938,844 + -3.0 3,938,844 + -3.3 3,938,844 + -2.6 3,938,844 + -2.8 3,938,844 + -3.5 3,938,844 + -1.0 3,938,844 + +0.4 3,938,844 + -2.7 3,938,845 - +0.1 3,938,862 + -2.1 3,938,863 - +0.8 3,938,863 - +0.9 3,938,863 - +0.8 3,939,275 - Psest_3772 0.41 -0.0 3,939,537 + Psest_3772 0.61 -1.6 3,939,537 + Psest_3772 0.61 -1.8 3,939,537 + Psest_3772 0.61 -2.0 3,939,537 + Psest_3772 0.61 +0.6 3,939,538 - Psest_3772 0.61 +0.0 3,939,538 - Psest_3772 0.61 -1.4 3,939,538 - Psest_3772 0.61 -0.2
Or see this region's nucleotide sequence