Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3213 and Psest_3214 are separated by 163 nucleotides Psest_3214 and Psest_3215 are separated by 133 nucleotides
Psest_3213: Psest_3213 - acetate kinase, at 3,380,932 to 3,382,119
_3213
Psest_3214: Psest_3214 - phosphate acetyltransferase, at 3,382,283 to 3,384,379
_3214
Psest_3215: Psest_3215 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,384,513 to 3,385,421
_3215
Position (kb)
3382
3383
3384
3385 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3381.350 kb on + strand, within Psest_3213 at 3381.351 kb on - strand, within Psest_3213 at 3381.351 kb on - strand, within Psest_3213 at 3381.351 kb on - strand, within Psest_3213 at 3381.424 kb on + strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.425 kb on - strand, within Psest_3213 at 3381.522 kb on + strand, within Psest_3213 at 3381.522 kb on + strand, within Psest_3213 at 3381.523 kb on - strand, within Psest_3213 at 3381.523 kb on - strand, within Psest_3213 at 3381.523 kb on - strand, within Psest_3213 at 3381.830 kb on + strand, within Psest_3213 at 3381.830 kb on + strand, within Psest_3213 at 3381.831 kb on - strand, within Psest_3213 at 3381.831 kb on - strand, within Psest_3213 at 3381.831 kb on - strand, within Psest_3213 at 3382.501 kb on - strand, within Psest_3214 at 3382.501 kb on - strand, within Psest_3214 at 3382.501 kb on - strand, within Psest_3214 at 3382.628 kb on + strand, within Psest_3214 at 3382.628 kb on + strand, within Psest_3214 at 3382.628 kb on + strand, within Psest_3214 at 3382.629 kb on - strand, within Psest_3214 at 3382.629 kb on - strand, within Psest_3214 at 3382.629 kb on - strand, within Psest_3214 at 3382.629 kb on - strand, within Psest_3214 at 3382.629 kb on - strand, within Psest_3214 at 3382.752 kb on - strand, within Psest_3214 at 3382.752 kb on - strand, within Psest_3214 at 3383.241 kb on - strand, within Psest_3214 at 3383.634 kb on - strand, within Psest_3214 at 3383.878 kb on - strand, within Psest_3214 at 3383.878 kb on - strand, within Psest_3214 at 3383.878 kb on - strand, within Psest_3214 at 3383.885 kb on + strand, within Psest_3214 at 3383.886 kb on - strand, within Psest_3214 at 3383.965 kb on - strand, within Psest_3214 at 3384.003 kb on - strand, within Psest_3214 at 3384.061 kb on + strand, within Psest_3214 at 3384.111 kb on - strand, within Psest_3214 at 3384.215 kb on - strand at 3384.221 kb on + strand at 3384.221 kb on + strand at 3384.221 kb on + strand at 3384.221 kb on + strand at 3384.222 kb on - strand at 3384.222 kb on - strand at 3384.222 kb on - strand at 3384.222 kb on - strand at 3384.222 kb on - strand at 3384.411 kb on + strand at 3384.412 kb on - strand at 3384.412 kb on - strand at 3384.777 kb on + strand, within Psest_3215 at 3384.954 kb on + strand, within Psest_3215 at 3384.967 kb on - strand, within Psest_3215 at 3385.020 kb on + strand, within Psest_3215 at 3385.118 kb on - strand, within Psest_3215 at 3385.282 kb on + strand, within Psest_3215 at 3385.308 kb on + strand, within Psest_3215 at 3385.308 kb on + strand, within Psest_3215 at 3385.308 kb on + strand, within Psest_3215 at 3385.308 kb on + strand, within Psest_3215 at 3385.308 kb on + strand, within Psest_3215 at 3385.308 kb on + strand, within Psest_3215 at 3385.309 kb on - strand, within Psest_3215
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 3,381,350 + Psest_3213 0.35 +0.6 3,381,351 - Psest_3213 0.35 -1.0 3,381,351 - Psest_3213 0.35 -1.3 3,381,351 - Psest_3213 0.35 +0.3 3,381,424 + Psest_3213 0.41 +0.8 3,381,425 - Psest_3213 0.41 -0.9 3,381,425 - Psest_3213 0.41 +0.5 3,381,425 - Psest_3213 0.41 -0.7 3,381,425 - Psest_3213 0.41 -0.0 3,381,425 - Psest_3213 0.41 +1.2 3,381,522 + Psest_3213 0.50 -1.3 3,381,522 + Psest_3213 0.50 -2.2 3,381,523 - Psest_3213 0.50 -0.3 3,381,523 - Psest_3213 0.50 -0.9 3,381,523 - Psest_3213 0.50 -1.3 3,381,830 + Psest_3213 0.76 -0.2 3,381,830 + Psest_3213 0.76 +0.3 3,381,831 - Psest_3213 0.76 -0.1 3,381,831 - Psest_3213 0.76 +0.5 3,381,831 - Psest_3213 0.76 -1.1 3,382,501 - Psest_3214 0.10 -0.8 3,382,501 - Psest_3214 0.10 -0.4 3,382,501 - Psest_3214 0.10 +0.2 3,382,628 + Psest_3214 0.16 -0.2 3,382,628 + Psest_3214 0.16 -0.1 3,382,628 + Psest_3214 0.16 -1.8 3,382,629 - Psest_3214 0.16 -0.0 3,382,629 - Psest_3214 0.16 +0.3 3,382,629 - Psest_3214 0.16 -0.2 3,382,629 - Psest_3214 0.16 +0.3 3,382,629 - Psest_3214 0.16 +0.2 3,382,752 - Psest_3214 0.22 -0.4 3,382,752 - Psest_3214 0.22 +1.3 3,383,241 - Psest_3214 0.46 -0.9 3,383,634 - Psest_3214 0.64 +1.4 3,383,878 - Psest_3214 0.76 -0.7 3,383,878 - Psest_3214 0.76 -0.6 3,383,878 - Psest_3214 0.76 -0.5 3,383,885 + Psest_3214 0.76 +0.9 3,383,886 - Psest_3214 0.76 -0.1 3,383,965 - Psest_3214 0.80 -0.9 3,384,003 - Psest_3214 0.82 +0.2 3,384,061 + Psest_3214 0.85 -1.4 3,384,111 - Psest_3214 0.87 +1.2 3,384,215 - +0.3 3,384,221 + -0.0 3,384,221 + +1.0 3,384,221 + -0.2 3,384,221 + -0.5 3,384,222 - +1.8 3,384,222 - +0.1 3,384,222 - +0.1 3,384,222 - -0.5 3,384,222 - +0.8 3,384,411 + -0.3 3,384,412 - +0.2 3,384,412 - -0.0 3,384,777 + Psest_3215 0.29 -0.2 3,384,954 + Psest_3215 0.49 +0.6 3,384,967 - Psest_3215 0.50 -0.2 3,385,020 + Psest_3215 0.56 +0.1 3,385,118 - Psest_3215 0.67 +0.6 3,385,282 + Psest_3215 0.85 +0.6 3,385,308 + Psest_3215 0.87 -2.6 3,385,308 + Psest_3215 0.87 -0.2 3,385,308 + Psest_3215 0.87 -1.1 3,385,308 + Psest_3215 0.87 +0.0 3,385,308 + Psest_3215 0.87 +0.4 3,385,308 + Psest_3215 0.87 +1.6 3,385,309 - Psest_3215 0.88 +0.9
Or see this region's nucleotide sequence