Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3771 and Psest_3772 are separated by 115 nucleotides Psest_3772 and Psest_3773 are separated by 38 nucleotides Psest_3773 and Psest_3774 are separated by 396 nucleotides
Psest_3771: Psest_3771 - probable ammonium transporter, marine subtype, at 3,937,369 to 3,938,619
_3771
Psest_3772: Psest_3772 - ammonium transporter, at 3,938,735 to 3,940,051
_3772
Psest_3773: Psest_3773 - Nitrogen regulatory protein PII, at 3,940,090 to 3,940,428
_3773
Psest_3774: Psest_3774 - Uncharacterized protein conserved in bacteria, at 3,940,825 to 3,941,085
_3774
Position (kb)
3938
3939
3940
3941 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3938.021 kb on + strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.022 kb on - strand, within Psest_3771 at 3938.169 kb on - strand, within Psest_3771 at 3938.303 kb on + strand, within Psest_3771 at 3938.304 kb on - strand, within Psest_3771 at 3938.304 kb on - strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.306 kb on + strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.307 kb on - strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.405 kb on + strand, within Psest_3771 at 3938.406 kb on - strand, within Psest_3771 at 3938.406 kb on - strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.414 kb on + strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.415 kb on - strand, within Psest_3771 at 3938.417 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.432 kb on + strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.433 kb on - strand, within Psest_3771 at 3938.453 kb on + strand, within Psest_3771 at 3938.453 kb on + strand, within Psest_3771 at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.570 kb on + strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.571 kb on - strand at 3938.614 kb on - strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.844 kb on + strand at 3938.845 kb on - strand at 3938.862 kb on + strand at 3938.863 kb on - strand at 3938.863 kb on - strand at 3938.863 kb on - strand at 3939.275 kb on - strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.537 kb on + strand, within Psest_3772 at 3939.538 kb on - strand, within Psest_3772 at 3939.538 kb on - strand, within Psest_3772 at 3939.538 kb on - strand, within Psest_3772 at 3939.799 kb on - strand, within Psest_3772 at 3939.799 kb on - strand, within Psest_3772 at 3940.004 kb on + strand at 3940.005 kb on - strand at 3940.005 kb on - strand at 3940.026 kb on - strand at 3940.057 kb on + strand at 3940.058 kb on - strand at 3940.091 kb on + strand at 3940.091 kb on + strand at 3940.092 kb on - strand at 3940.092 kb on - strand at 3940.092 kb on - strand at 3940.092 kb on - strand at 3940.092 kb on - strand at 3940.092 kb on - strand at 3940.791 kb on + strand at 3940.791 kb on + strand at 3940.791 kb on + strand at 3940.791 kb on + strand at 3940.791 kb on + strand at 3940.791 kb on + strand at 3940.791 kb on + strand at 3940.847 kb on + strand at 3940.847 kb on + strand at 3940.847 kb on + strand at 3940.847 kb on + strand at 3940.847 kb on + strand at 3940.847 kb on + strand at 3940.847 kb on + strand at 3940.848 kb on - strand at 3940.937 kb on + strand, within Psest_3774
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 3,938,021 + Psest_3771 0.52 -0.9 3,938,022 - Psest_3771 0.52 +0.1 3,938,022 - Psest_3771 0.52 -0.1 3,938,022 - Psest_3771 0.52 -0.9 3,938,022 - Psest_3771 0.52 -0.2 3,938,169 - Psest_3771 0.64 -0.3 3,938,303 + Psest_3771 0.75 +0.4 3,938,304 - Psest_3771 0.75 -1.1 3,938,304 - Psest_3771 0.75 -3.7 3,938,306 + Psest_3771 0.75 -0.8 3,938,306 + Psest_3771 0.75 +1.0 3,938,306 + Psest_3771 0.75 +0.2 3,938,306 + Psest_3771 0.75 -1.3 3,938,307 - Psest_3771 0.75 -2.1 3,938,307 - Psest_3771 0.75 -1.5 3,938,307 - Psest_3771 0.75 -0.5 3,938,307 - Psest_3771 0.75 -0.2 3,938,307 - Psest_3771 0.75 -1.2 3,938,307 - Psest_3771 0.75 -1.7 3,938,307 - Psest_3771 0.75 -0.5 3,938,405 + Psest_3771 0.83 -0.3 3,938,405 + Psest_3771 0.83 -0.9 3,938,405 + Psest_3771 0.83 +0.6 3,938,405 + Psest_3771 0.83 -0.7 3,938,405 + Psest_3771 0.83 -0.7 3,938,405 + Psest_3771 0.83 +0.4 3,938,405 + Psest_3771 0.83 +0.3 3,938,405 + Psest_3771 0.83 -1.3 3,938,406 - Psest_3771 0.83 -0.5 3,938,406 - Psest_3771 0.83 +0.0 3,938,414 + Psest_3771 0.84 +0.8 3,938,414 + Psest_3771 0.84 -1.1 3,938,414 + Psest_3771 0.84 -0.7 3,938,414 + Psest_3771 0.84 +0.2 3,938,414 + Psest_3771 0.84 -0.0 3,938,414 + Psest_3771 0.84 +1.1 3,938,414 + Psest_3771 0.84 -0.2 3,938,414 + Psest_3771 0.84 +1.3 3,938,414 + Psest_3771 0.84 -0.0 3,938,414 + Psest_3771 0.84 -0.4 3,938,414 + Psest_3771 0.84 +0.5 3,938,414 + Psest_3771 0.84 +0.1 3,938,414 + Psest_3771 0.84 -0.4 3,938,414 + Psest_3771 0.84 +0.3 3,938,414 + Psest_3771 0.84 -0.6 3,938,414 + Psest_3771 0.84 +0.6 3,938,414 + Psest_3771 0.84 +1.7 3,938,414 + Psest_3771 0.84 +0.6 3,938,414 + Psest_3771 0.84 -0.6 3,938,414 + Psest_3771 0.84 -2.7 3,938,415 - Psest_3771 0.84 +0.3 3,938,415 - Psest_3771 0.84 -0.2 3,938,415 - Psest_3771 0.84 +0.1 3,938,415 - Psest_3771 0.84 +0.9 3,938,415 - Psest_3771 0.84 -0.6 3,938,415 - Psest_3771 0.84 -0.4 3,938,415 - Psest_3771 0.84 -0.0 3,938,415 - Psest_3771 0.84 +0.1 3,938,415 - Psest_3771 0.84 -0.7 3,938,415 - Psest_3771 0.84 -0.5 3,938,415 - Psest_3771 0.84 +0.2 3,938,415 - Psest_3771 0.84 -0.7 3,938,415 - Psest_3771 0.84 -1.1 3,938,415 - Psest_3771 0.84 -1.3 3,938,415 - Psest_3771 0.84 -0.4 3,938,415 - Psest_3771 0.84 -1.9 3,938,415 - Psest_3771 0.84 +0.2 3,938,415 - Psest_3771 0.84 -1.5 3,938,415 - Psest_3771 0.84 -0.7 3,938,415 - Psest_3771 0.84 -1.0 3,938,415 - Psest_3771 0.84 -1.5 3,938,415 - Psest_3771 0.84 -1.1 3,938,415 - Psest_3771 0.84 +0.4 3,938,415 - Psest_3771 0.84 -1.1 3,938,415 - Psest_3771 0.84 +0.1 3,938,415 - Psest_3771 0.84 +0.4 3,938,415 - Psest_3771 0.84 -0.0 3,938,415 - Psest_3771 0.84 -1.0 3,938,415 - Psest_3771 0.84 -0.4 3,938,415 - Psest_3771 0.84 +1.0 3,938,415 - Psest_3771 0.84 -0.9 3,938,415 - Psest_3771 0.84 +0.3 3,938,417 + Psest_3771 0.84 +0.2 3,938,432 + Psest_3771 0.85 -0.5 3,938,432 + Psest_3771 0.85 -0.2 3,938,432 + Psest_3771 0.85 +0.2 3,938,432 + Psest_3771 0.85 +0.2 3,938,432 + Psest_3771 0.85 +0.2 3,938,432 + Psest_3771 0.85 -0.5 3,938,432 + Psest_3771 0.85 -2.2 3,938,432 + Psest_3771 0.85 -2.3 3,938,432 + Psest_3771 0.85 +0.5 3,938,432 + Psest_3771 0.85 -0.1 3,938,432 + Psest_3771 0.85 -1.1 3,938,433 - Psest_3771 0.85 +0.2 3,938,433 - Psest_3771 0.85 -0.5 3,938,433 - Psest_3771 0.85 -0.1 3,938,433 - Psest_3771 0.85 +0.7 3,938,433 - Psest_3771 0.85 +0.5 3,938,433 - Psest_3771 0.85 -1.3 3,938,433 - Psest_3771 0.85 +0.0 3,938,433 - Psest_3771 0.85 -0.7 3,938,433 - Psest_3771 0.85 +0.7 3,938,433 - Psest_3771 0.85 +1.1 3,938,433 - Psest_3771 0.85 -0.3 3,938,433 - Psest_3771 0.85 -1.5 3,938,433 - Psest_3771 0.85 -1.2 3,938,453 + Psest_3771 0.87 -0.8 3,938,453 + Psest_3771 0.87 -0.6 3,938,570 + -1.7 3,938,570 + +0.7 3,938,570 + +1.6 3,938,570 + +0.4 3,938,570 + -0.3 3,938,570 + -0.1 3,938,570 + -0.9 3,938,570 + +1.3 3,938,570 + -0.5 3,938,571 - +0.2 3,938,571 - +1.7 3,938,571 - +0.3 3,938,571 - +0.4 3,938,571 - +0.1 3,938,614 - -0.5 3,938,844 + +0.1 3,938,844 + -0.8 3,938,844 + -1.0 3,938,844 + -2.0 3,938,844 + -1.3 3,938,844 + +0.5 3,938,844 + +0.3 3,938,844 + +0.7 3,938,845 - +0.3 3,938,862 + -0.4 3,938,863 - +0.3 3,938,863 - +1.5 3,938,863 - +0.2 3,939,275 - Psest_3772 0.41 +1.0 3,939,537 + Psest_3772 0.61 -0.7 3,939,537 + Psest_3772 0.61 -0.8 3,939,537 + Psest_3772 0.61 -0.0 3,939,537 + Psest_3772 0.61 +2.8 3,939,538 - Psest_3772 0.61 +1.0 3,939,538 - Psest_3772 0.61 +0.9 3,939,538 - Psest_3772 0.61 +1.0 3,939,799 - Psest_3772 0.81 -1.7 3,939,799 - Psest_3772 0.81 -0.5 3,940,004 + +0.4 3,940,005 - -0.5 3,940,005 - -0.0 3,940,026 - -0.4 3,940,057 + -0.6 3,940,058 - -0.5 3,940,091 + +0.7 3,940,091 + +1.5 3,940,092 - +2.9 3,940,092 - +0.9 3,940,092 - +0.7 3,940,092 - +0.2 3,940,092 - +1.7 3,940,092 - +2.7 3,940,791 + +0.1 3,940,791 + +1.8 3,940,791 + +0.4 3,940,791 + +0.2 3,940,791 + +0.9 3,940,791 + -0.1 3,940,791 + +1.5 3,940,847 + -0.5 3,940,847 + +0.1 3,940,847 + -1.5 3,940,847 + -0.2 3,940,847 + -0.6 3,940,847 + -0.6 3,940,847 + -0.2 3,940,848 - +1.5 3,940,937 + Psest_3774 0.43 -0.5
Or see this region's nucleotide sequence