Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2433 and Psest_2434 are separated by 65 nucleotides Psest_2434 and Psest_2435 are separated by 121 nucleotides
Psest_2433: Psest_2433 - alpha-glucan phosphorylases, at 2,599,835 to 2,602,345
_2433
Psest_2434: Psest_2434 - Protein of unknown function (DUF2892)., at 2,602,411 to 2,602,764
_2434
Psest_2435: Psest_2435 - Transcriptional regulator, at 2,602,886 to 2,603,776
_2435
Position (kb)
2602
2603 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2601.417 kb on - strand, within Psest_2433 at 2601.545 kb on + strand, within Psest_2433 at 2601.546 kb on - strand, within Psest_2433 at 2601.551 kb on - strand, within Psest_2433 at 2601.702 kb on - strand, within Psest_2433 at 2601.738 kb on + strand, within Psest_2433 at 2601.738 kb on + strand, within Psest_2433 at 2601.739 kb on - strand, within Psest_2433 at 2601.818 kb on + strand, within Psest_2433 at 2601.818 kb on + strand, within Psest_2433 at 2601.818 kb on + strand, within Psest_2433 at 2601.818 kb on + strand, within Psest_2433 at 2601.819 kb on - strand, within Psest_2433 at 2601.819 kb on - strand, within Psest_2433 at 2601.819 kb on - strand, within Psest_2433 at 2601.819 kb on - strand, within Psest_2433 at 2601.819 kb on - strand, within Psest_2433 at 2601.923 kb on + strand, within Psest_2433 at 2601.923 kb on + strand, within Psest_2433 at 2601.938 kb on + strand, within Psest_2433 at 2601.938 kb on + strand, within Psest_2433 at 2602.031 kb on + strand, within Psest_2433 at 2602.031 kb on + strand, within Psest_2433 at 2602.242 kb on + strand at 2602.243 kb on - strand at 2602.265 kb on + strand at 2602.266 kb on - strand at 2602.266 kb on - strand at 2602.380 kb on + strand at 2602.380 kb on + strand at 2602.380 kb on + strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.381 kb on - strand at 2602.382 kb on + strand at 2602.382 kb on + strand at 2602.395 kb on + strand at 2602.395 kb on + strand at 2602.494 kb on - strand, within Psest_2434 at 2602.656 kb on + strand, within Psest_2434 at 2602.656 kb on + strand, within Psest_2434 at 2602.656 kb on + strand, within Psest_2434 at 2602.884 kb on - strand at 2602.887 kb on + strand at 2602.887 kb on + strand at 2602.888 kb on - strand at 2602.888 kb on - strand at 2602.888 kb on - strand at 2602.936 kb on - strand at 2603.205 kb on + strand, within Psest_2435 at 2603.205 kb on + strand, within Psest_2435 at 2603.206 kb on - strand, within Psest_2435 at 2603.206 kb on - strand, within Psest_2435 at 2603.206 kb on - strand, within Psest_2435 at 2603.268 kb on + strand, within Psest_2435 at 2603.268 kb on + strand, within Psest_2435 at 2603.269 kb on - strand, within Psest_2435 at 2603.283 kb on + strand, within Psest_2435 at 2603.283 kb on + strand, within Psest_2435 at 2603.284 kb on - strand, within Psest_2435 at 2603.284 kb on - strand, within Psest_2435 at 2603.284 kb on - strand, within Psest_2435 at 2603.284 kb on - strand, within Psest_2435 at 2603.614 kb on - strand, within Psest_2435 at 2603.754 kb on + strand at 2603.754 kb on + strand at 2603.755 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 2,601,417 - Psest_2433 0.63 +2.0 2,601,545 + Psest_2433 0.68 -1.1 2,601,546 - Psest_2433 0.68 -0.3 2,601,551 - Psest_2433 0.68 +0.3 2,601,702 - Psest_2433 0.74 +0.3 2,601,738 + Psest_2433 0.76 -0.6 2,601,738 + Psest_2433 0.76 +0.2 2,601,739 - Psest_2433 0.76 -0.2 2,601,818 + Psest_2433 0.79 +0.2 2,601,818 + Psest_2433 0.79 -1.2 2,601,818 + Psest_2433 0.79 -0.2 2,601,818 + Psest_2433 0.79 -1.8 2,601,819 - Psest_2433 0.79 +0.0 2,601,819 - Psest_2433 0.79 +0.0 2,601,819 - Psest_2433 0.79 -0.3 2,601,819 - Psest_2433 0.79 +0.5 2,601,819 - Psest_2433 0.79 +0.7 2,601,923 + Psest_2433 0.83 +0.0 2,601,923 + Psest_2433 0.83 +0.3 2,601,938 + Psest_2433 0.84 +0.2 2,601,938 + Psest_2433 0.84 -0.1 2,602,031 + Psest_2433 0.87 -1.1 2,602,031 + Psest_2433 0.87 -0.2 2,602,242 + -0.1 2,602,243 - +0.5 2,602,265 + +0.9 2,602,266 - -0.2 2,602,266 - +0.5 2,602,380 + +0.2 2,602,380 + -0.8 2,602,380 + -0.3 2,602,381 - +0.7 2,602,381 - +1.0 2,602,381 - +0.4 2,602,381 - +0.7 2,602,381 - +0.5 2,602,381 - +0.5 2,602,381 - +0.2 2,602,381 - +0.7 2,602,381 - +1.0 2,602,381 - +1.1 2,602,381 - -2.4 2,602,381 - +0.1 2,602,381 - +1.1 2,602,381 - -0.1 2,602,381 - +0.7 2,602,381 - +0.9 2,602,381 - +0.1 2,602,381 - -1.3 2,602,382 + +0.1 2,602,382 + +0.3 2,602,395 + -0.2 2,602,395 + +0.0 2,602,494 - Psest_2434 0.23 +0.8 2,602,656 + Psest_2434 0.69 +0.9 2,602,656 + Psest_2434 0.69 +0.9 2,602,656 + Psest_2434 0.69 -0.6 2,602,884 - -0.1 2,602,887 + -0.0 2,602,887 + -0.4 2,602,888 - +1.1 2,602,888 - +0.1 2,602,888 - +0.5 2,602,936 - -0.8 2,603,205 + Psest_2435 0.36 +1.0 2,603,205 + Psest_2435 0.36 +0.2 2,603,206 - Psest_2435 0.36 -0.8 2,603,206 - Psest_2435 0.36 -0.1 2,603,206 - Psest_2435 0.36 -0.7 2,603,268 + Psest_2435 0.43 +1.3 2,603,268 + Psest_2435 0.43 +0.9 2,603,269 - Psest_2435 0.43 +0.5 2,603,283 + Psest_2435 0.45 +0.4 2,603,283 + Psest_2435 0.45 +0.3 2,603,284 - Psest_2435 0.45 -0.4 2,603,284 - Psest_2435 0.45 +0.1 2,603,284 - Psest_2435 0.45 -0.5 2,603,284 - Psest_2435 0.45 -0.3 2,603,614 - Psest_2435 0.82 +0.2 2,603,754 + +0.5 2,603,754 + +0.3 2,603,755 - +0.3
Or see this region's nucleotide sequence