Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1621 and Psest_1622 are separated by 9 nucleotides Psest_1622 and Psest_1623 are separated by 94 nucleotides Psest_1623 and Psest_1624 are separated by 28 nucleotides
Psest_1621: Psest_1621 - Uncharacterized protein conserved in bacteria, at 1,725,084 to 1,726,214
_1621
Psest_1622: Psest_1622 - hypothetical protein, at 1,726,224 to 1,726,646
_1622
Psest_1623: Psest_1623 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 1,726,741 to 1,727,295
_1623
Psest_1624: Psest_1624 - Transcriptional regulator, at 1,727,324 to 1,728,232
_1624
Position (kb)
1726
1727 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1725.306 kb on + strand, within Psest_1621 at 1725.307 kb on - strand, within Psest_1621 at 1725.315 kb on + strand, within Psest_1621 at 1725.315 kb on + strand, within Psest_1621 at 1725.315 kb on + strand, within Psest_1621 at 1725.315 kb on + strand, within Psest_1621 at 1725.316 kb on - strand, within Psest_1621 at 1725.316 kb on - strand, within Psest_1621 at 1725.316 kb on - strand, within Psest_1621 at 1725.316 kb on - strand, within Psest_1621 at 1725.369 kb on + strand, within Psest_1621 at 1725.656 kb on - strand, within Psest_1621 at 1725.747 kb on + strand, within Psest_1621 at 1725.769 kb on - strand, within Psest_1621 at 1725.769 kb on - strand, within Psest_1621 at 1725.769 kb on - strand, within Psest_1621 at 1725.769 kb on - strand, within Psest_1621 at 1725.918 kb on + strand, within Psest_1621 at 1726.092 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.096 kb on + strand, within Psest_1621 at 1726.097 kb on - strand, within Psest_1621 at 1726.097 kb on - strand, within Psest_1621 at 1726.097 kb on - strand, within Psest_1621 at 1726.212 kb on + strand at 1726.212 kb on + strand at 1726.213 kb on - strand at 1726.316 kb on - strand, within Psest_1622 at 1726.389 kb on - strand, within Psest_1622 at 1726.406 kb on - strand, within Psest_1622 at 1726.406 kb on - strand, within Psest_1622 at 1726.406 kb on - strand, within Psest_1622 at 1726.584 kb on + strand, within Psest_1622 at 1726.584 kb on + strand, within Psest_1622 at 1726.585 kb on - strand, within Psest_1622 at 1726.694 kb on - strand at 1726.705 kb on + strand at 1726.784 kb on - strand at 1726.852 kb on + strand, within Psest_1623 at 1726.853 kb on - strand, within Psest_1623 at 1727.117 kb on + strand, within Psest_1623 at 1727.131 kb on + strand, within Psest_1623 at 1727.131 kb on + strand, within Psest_1623 at 1727.131 kb on + strand, within Psest_1623 at 1727.132 kb on - strand, within Psest_1623 at 1727.136 kb on - strand, within Psest_1623 at 1727.338 kb on + strand at 1727.338 kb on + strand at 1727.339 kb on - strand at 1727.358 kb on + strand at 1727.358 kb on + strand at 1727.359 kb on - strand at 1727.416 kb on + strand, within Psest_1624 at 1727.421 kb on + strand, within Psest_1624 at 1727.421 kb on + strand, within Psest_1624 at 1727.422 kb on - strand, within Psest_1624 at 1727.422 kb on - strand, within Psest_1624 at 1727.422 kb on - strand, within Psest_1624 at 1727.427 kb on + strand, within Psest_1624 at 1727.427 kb on + strand, within Psest_1624 at 1727.427 kb on + strand, within Psest_1624 at 1727.427 kb on + strand, within Psest_1624 at 1727.427 kb on + strand, within Psest_1624 at 1727.427 kb on + strand, within Psest_1624 at 1727.428 kb on - strand, within Psest_1624 at 1727.428 kb on - strand, within Psest_1624 at 1727.428 kb on - strand, within Psest_1624
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 1,725,306 + Psest_1621 0.20 -0.4 1,725,307 - Psest_1621 0.20 -0.1 1,725,315 + Psest_1621 0.20 +0.1 1,725,315 + Psest_1621 0.20 +0.0 1,725,315 + Psest_1621 0.20 -1.9 1,725,315 + Psest_1621 0.20 +2.0 1,725,316 - Psest_1621 0.21 -0.1 1,725,316 - Psest_1621 0.21 +0.7 1,725,316 - Psest_1621 0.21 +0.2 1,725,316 - Psest_1621 0.21 +0.3 1,725,369 + Psest_1621 0.25 +0.5 1,725,656 - Psest_1621 0.51 -0.3 1,725,747 + Psest_1621 0.59 -0.3 1,725,769 - Psest_1621 0.61 +1.1 1,725,769 - Psest_1621 0.61 +1.7 1,725,769 - Psest_1621 0.61 -0.1 1,725,769 - Psest_1621 0.61 -0.4 1,725,918 + Psest_1621 0.74 -2.4 1,726,092 + Psest_1621 0.89 +0.0 1,726,096 + Psest_1621 0.89 +0.5 1,726,096 + Psest_1621 0.89 +1.0 1,726,096 + Psest_1621 0.89 -0.3 1,726,096 + Psest_1621 0.89 -0.3 1,726,096 + Psest_1621 0.89 -0.6 1,726,096 + Psest_1621 0.89 -0.1 1,726,096 + Psest_1621 0.89 +0.6 1,726,096 + Psest_1621 0.89 +0.2 1,726,097 - Psest_1621 0.90 +0.9 1,726,097 - Psest_1621 0.90 -1.0 1,726,097 - Psest_1621 0.90 +0.3 1,726,212 + +1.1 1,726,212 + +0.6 1,726,213 - +0.7 1,726,316 - Psest_1622 0.22 +1.4 1,726,389 - Psest_1622 0.39 -0.5 1,726,406 - Psest_1622 0.43 +0.9 1,726,406 - Psest_1622 0.43 +0.4 1,726,406 - Psest_1622 0.43 +2.3 1,726,584 + Psest_1622 0.85 +0.6 1,726,584 + Psest_1622 0.85 +0.3 1,726,585 - Psest_1622 0.85 +0.3 1,726,694 - +0.1 1,726,705 + -0.9 1,726,784 - +1.7 1,726,852 + Psest_1623 0.20 +0.7 1,726,853 - Psest_1623 0.20 +0.8 1,727,117 + Psest_1623 0.68 +0.4 1,727,131 + Psest_1623 0.70 -0.2 1,727,131 + Psest_1623 0.70 -0.3 1,727,131 + Psest_1623 0.70 -1.3 1,727,132 - Psest_1623 0.70 -0.3 1,727,136 - Psest_1623 0.71 -0.1 1,727,338 + +0.6 1,727,338 + -1.9 1,727,339 - +0.8 1,727,358 + -2.0 1,727,358 + -0.4 1,727,359 - +0.7 1,727,416 + Psest_1624 0.10 +0.6 1,727,421 + Psest_1624 0.11 +0.1 1,727,421 + Psest_1624 0.11 +2.0 1,727,422 - Psest_1624 0.11 -1.0 1,727,422 - Psest_1624 0.11 -0.1 1,727,422 - Psest_1624 0.11 +2.0 1,727,427 + Psest_1624 0.11 +0.2 1,727,427 + Psest_1624 0.11 +0.5 1,727,427 + Psest_1624 0.11 +1.9 1,727,427 + Psest_1624 0.11 -1.2 1,727,427 + Psest_1624 0.11 +1.6 1,727,427 + Psest_1624 0.11 -1.7 1,727,428 - Psest_1624 0.11 +0.8 1,727,428 - Psest_1624 0.11 +0.7 1,727,428 - Psest_1624 0.11 +0.4
Or see this region's nucleotide sequence