Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1491

Experiment: Putrescine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Putrescine (N)
1,592,033	+				-1.6
1,592,033	+				-3.7
1,592,033	+				+0.1
1,592,033	+				-0.8
1,592,034	-				-0.3
1,592,034	-				+0.3
1,592,052	+				+1.3
1,592,052	+				+1.5
1,592,053	-				-0.6
1,592,065	+				-0.7
1,592,066	-				+4.2
1,592,208	+				+1.9
1,592,262	+				+1.1
1,592,262	+				-1.3
1,592,262	+				+0.5
1,592,262	+				+0.9
1,592,349	+				+2.7
1,592,349	+				+0.7
1,592,349	+				-1.8
1,592,349	+				+0.0
1,592,349	+				-2.1
1,592,349	+				-0.2
1,592,349	+				-0.5
1,592,349	+				+1.0
1,592,349	+				-2.0
1,592,349	+				+0.2
1,592,349	+				+0.1
1,592,349	+				+0.8
1,592,349	+				+2.4
1,592,349	+				-0.7
1,592,349	+				-1.1
1,592,349	+				-0.3
1,592,349	+				-0.7
1,592,349	+				+0.1
1,592,350	-				+1.1
1,592,350	-				+1.0
1,592,350	-				-0.6
1,592,350	-				-1.0
1,592,350	-				+0.8
1,592,350	-				+0.7
1,592,350	-				+0.9
1,592,350	-				-1.2
1,592,350	-				-1.6
1,592,350	-				-0.8
1,592,350	-				+2.5
1,592,351	+				+0.3
1,592,351	+				+0.0
1,592,351	+				+1.0
1,592,351	+				+0.0
1,592,351	+				+0.7
1,592,351	+				+0.5
1,592,351	+				+0.2
1,592,351	+				+0.0
1,592,351	+				-0.2
1,592,351	+				+2.1
1,592,351	+				-0.2
1,592,351	+				+1.1
1,592,351	+				-0.6
1,592,351	+				-0.2
1,592,351	+				-1.1
1,592,351	+				-1.1
1,592,351	+				+1.0
1,592,351	+				-1.2
1,592,351	+				-2.0
1,592,351	+				-0.7
1,592,351	+				+0.5
1,592,351	+				-1.2
1,592,351	+				-0.5
1,592,351	+				+0.5
1,592,351	+				+1.1
1,592,351	+				-0.4
1,592,351	+				-0.3
1,592,351	+				-3.7
1,592,351	+				-0.5
1,592,351	+				-0.1
1,592,351	+				-3.6
1,592,351	+				-0.2
1,592,352	-				-0.3
1,592,352	-				+0.4
1,592,352	-				+0.7
1,592,352	-				+0.4
1,592,352	-				-0.6
1,592,352	-				-1.0
1,592,352	-				+2.2
1,592,352	-				-1.6
1,592,352	-				-1.8
1,592,352	-				+0.8
1,592,352	-				-1.2
1,592,352	-				-0.9
1,592,352	-				+2.2
1,592,352	-				+0.1
1,592,352	-				+0.7
1,592,352	-				-0.4
1,592,352	-				-0.0
1,592,352	-				+0.9
1,592,352	-				+1.9
1,592,352	-				+0.6
1,592,384	+				-0.7
1,592,384	+				-0.1
1,592,384	+				-0.1
1,592,600	+		Psest_1489	0.58	+0.4
1,592,678	+		Psest_1489	0.77	-0.4
1,592,697	+		Psest_1489	0.81	+0.1
1,592,697	+		Psest_1489	0.81	-0.7
1,592,698	-		Psest_1489	0.81	+0.7
1,592,698	-		Psest_1489	0.81	+1.0
1,592,698	-		Psest_1489	0.81	+0.9
1,592,978	+				-0.3
1,592,978	+				+0.5
1,593,193	+		Psest_1491	0.26	+1.7
1,593,413	-		Psest_1491	0.62	+0.6
1,593,486	-		Psest_1491	0.74	+0.8
1,593,486	-		Psest_1491	0.74	-1.3
1,593,602	+				+0.8
1,593,653	-				-0.1
1,593,653	-				-1.6
1,593,653	-				+0.7
1,593,653	-				-1.5
1,593,653	-				-0.2
1,593,773	+				-1.1
1,593,773	+				+1.3
1,593,774	-				-1.6
1,593,777	+				+0.2
1,593,777	+				+0.3
1,593,778	-				-0.8
1,593,783	+				+0.7
1,593,783	+				-0.6
1,593,783	+				+0.3
1,593,783	+				+1.0
1,593,832	+				-0.2
1,593,832	+				+1.3
1,593,832	+				-0.4
1,593,839	+				-0.4
1,593,839	+				-0.7
1,593,839	+				-0.1
1,593,839	+				-1.1
1,593,857	+				+0.3
1,594,141	+		Psest_1492	0.49	+0.0
1,594,141	+		Psest_1492	0.49	+0.6
1,594,141	+		Psest_1492	0.49	-1.9
1,594,141	+		Psest_1492	0.49	-0.1
1,594,142	-		Psest_1492	0.49	+0.4
1,594,142	-		Psest_1492	0.49	-2.6
1,594,216	+		Psest_1492	0.65	-1.0
1,594,235	+		Psest_1492	0.69	+2.5
1,594,235	+		Psest_1492	0.69	-1.4
1,594,236	-		Psest_1492	0.69	-0.3
1,594,294	+		Psest_1492	0.81	-0.6
1,594,295	-		Psest_1492	0.81	-1.6
1,594,295	-		Psest_1492	0.81	-0.6
1,594,295	-		Psest_1492	0.81	+0.0
1,594,295	-		Psest_1492	0.81	-0.6
1,594,301	+		Psest_1492	0.83	+1.7
1,594,301	+		Psest_1492	0.83	-0.3
1,594,302	-		Psest_1492	0.83	-1.3
1,594,302	-		Psest_1492	0.83	-2.0
1,594,302	-		Psest_1492	0.83	-0.6
1,594,302	-		Psest_1492	0.83	+0.4
1,594,302	-		Psest_1492	0.83	-0.8
1,594,303	+		Psest_1492	0.83	+0.0
1,594,303	+		Psest_1492	0.83	+1.6
1,594,303	+		Psest_1492	0.83	+0.8
1,594,303	+		Psest_1492	0.83	-1.3
1,594,303	+		Psest_1492	0.83	+1.6
1,594,303	+		Psest_1492	0.83	-2.8
1,594,303	+		Psest_1492	0.83	+0.8
1,594,303	+		Psest_1492	0.83	+0.7
1,594,303	+		Psest_1492	0.83	-0.6
1,594,303	+		Psest_1492	0.83	+1.2
1,594,303	+		Psest_1492	0.83	-1.3
1,594,303	+		Psest_1492	0.83	-0.8
1,594,303	+		Psest_1492	0.83	-0.6
1,594,303	+		Psest_1492	0.83	+2.2
1,594,303	+		Psest_1492	0.83	-0.7
1,594,303	+		Psest_1492	0.83	-1.3
1,594,303	+		Psest_1492	0.83	+0.9
1,594,304	-		Psest_1492	0.83	-1.0
1,594,304	-		Psest_1492	0.83	-0.1
1,594,304	-		Psest_1492	0.83	-1.6
1,594,304	-		Psest_1492	0.83	-1.5
1,594,304	-		Psest_1492	0.83	-2.4
1,594,304	-		Psest_1492	0.83	-0.3
1,594,304	-		Psest_1492	0.83	-0.1
1,594,304	-		Psest_1492	0.83	-0.4
1,594,304	-		Psest_1492	0.83	-1.8
1,594,304	-		Psest_1492	0.83	-2.2
1,594,412	+				+3.0
1,594,412	+				-2.6
1,594,412	+				+0.3
1,594,412	+				-2.6
1,594,412	+				+1.0
1,594,412	+				+0.4
1,594,413	-				+0.6
1,594,413	-				-0.6
1,594,413	-				-1.4
1,594,413	-				+0.5
1,594,413	-				-1.9
1,594,413	-				-0.4
1,594,413	-				-0.8
1,594,416	+				-0.2
1,594,417	-				+0.5
1,594,417	-				+0.8
1,594,417	-				+0.5
1,594,417	-				+0.8
1,594,548	+				-0.6
1,594,548	+				+0.7
1,594,548	+				+0.1
1,594,552	+				-2.8
1,594,552	+				+0.5
1,594,552	+				-1.9
1,594,560	+				-1.4
1,594,560	+				-1.0
1,594,560	+				-0.3
1,594,560	+				-2.2
1,594,560	+				+2.8