Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4297 and Psest_4298 are separated by 0 nucleotides Psest_4298 and Psest_4299 overlap by 8 nucleotides
Psest_4297: Psest_4297 - PAS domain S-box, at 4,491,792 to 4,494,203
_4297
Psest_4298: Psest_4298 - Response regulator containing a CheY-like receiver domain and a GGDEF domain, at 4,494,204 to 4,494,590
_4298
Psest_4299: Psest_4299 - diguanylate cyclase (GGDEF) domain, at 4,494,583 to 4,496,220
_4299
Position (kb)
4494
4495 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4493.326 kb on + strand, within Psest_4297 at 4493.326 kb on + strand, within Psest_4297 at 4493.326 kb on + strand, within Psest_4297 at 4493.327 kb on - strand, within Psest_4297 at 4493.327 kb on - strand, within Psest_4297 at 4493.327 kb on - strand, within Psest_4297 at 4493.327 kb on - strand, within Psest_4297 at 4493.327 kb on - strand, within Psest_4297 at 4493.430 kb on + strand, within Psest_4297 at 4493.430 kb on + strand, within Psest_4297 at 4493.430 kb on + strand, within Psest_4297 at 4493.430 kb on + strand, within Psest_4297 at 4493.430 kb on + strand, within Psest_4297 at 4493.431 kb on - strand, within Psest_4297 at 4493.431 kb on - strand, within Psest_4297 at 4493.431 kb on - strand, within Psest_4297 at 4493.431 kb on - strand, within Psest_4297 at 4493.784 kb on + strand, within Psest_4297 at 4493.785 kb on - strand, within Psest_4297 at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.201 kb on + strand at 4494.202 kb on - strand at 4494.202 kb on - strand at 4494.202 kb on - strand at 4494.202 kb on - strand at 4494.442 kb on + strand, within Psest_4298 at 4494.596 kb on + strand at 4494.597 kb on - strand at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.988 kb on + strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4494.989 kb on - strand, within Psest_4299 at 4495.390 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.579 kb on + strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299 at 4495.580 kb on - strand, within Psest_4299
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 4,493,326 + Psest_4297 0.64 +0.7 4,493,326 + Psest_4297 0.64 -0.5 4,493,326 + Psest_4297 0.64 +1.2 4,493,327 - Psest_4297 0.64 +0.4 4,493,327 - Psest_4297 0.64 +1.4 4,493,327 - Psest_4297 0.64 +0.4 4,493,327 - Psest_4297 0.64 -1.2 4,493,327 - Psest_4297 0.64 +0.3 4,493,430 + Psest_4297 0.68 +0.3 4,493,430 + Psest_4297 0.68 -2.2 4,493,430 + Psest_4297 0.68 +0.6 4,493,430 + Psest_4297 0.68 -1.5 4,493,430 + Psest_4297 0.68 -1.3 4,493,431 - Psest_4297 0.68 +1.6 4,493,431 - Psest_4297 0.68 -0.3 4,493,431 - Psest_4297 0.68 +0.5 4,493,431 - Psest_4297 0.68 -1.5 4,493,784 + Psest_4297 0.83 -1.8 4,493,785 - Psest_4297 0.83 +1.8 4,494,201 + +0.4 4,494,201 + +0.2 4,494,201 + +2.2 4,494,201 + +1.3 4,494,201 + +1.4 4,494,202 - -0.6 4,494,202 - +1.4 4,494,202 - +2.1 4,494,202 - -1.1 4,494,442 + Psest_4298 0.61 +2.2 4,494,596 + +0.3 4,494,597 - -2.0 4,494,988 + Psest_4299 0.25 -0.5 4,494,988 + Psest_4299 0.25 +1.1 4,494,988 + Psest_4299 0.25 -1.2 4,494,988 + Psest_4299 0.25 -1.4 4,494,988 + Psest_4299 0.25 +0.8 4,494,988 + Psest_4299 0.25 -0.7 4,494,989 - Psest_4299 0.25 -1.0 4,494,989 - Psest_4299 0.25 -0.2 4,494,989 - Psest_4299 0.25 -1.4 4,494,989 - Psest_4299 0.25 -0.3 4,494,989 - Psest_4299 0.25 -2.4 4,494,989 - Psest_4299 0.25 +0.3 4,494,989 - Psest_4299 0.25 -0.3 4,494,989 - Psest_4299 0.25 -2.4 4,495,390 + Psest_4299 0.49 -1.4 4,495,579 + Psest_4299 0.61 -0.4 4,495,579 + Psest_4299 0.61 +1.7 4,495,579 + Psest_4299 0.61 -0.6 4,495,579 + Psest_4299 0.61 +0.0 4,495,579 + Psest_4299 0.61 +0.5 4,495,580 - Psest_4299 0.61 +1.3 4,495,580 - Psest_4299 0.61 -0.3 4,495,580 - Psest_4299 0.61 -0.4 4,495,580 - Psest_4299 0.61 -0.6 4,495,580 - Psest_4299 0.61 -0.1
Or see this region's nucleotide sequence